Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf17O88472 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf17O88472 Gm2399-201ENSMUST00000104944 225 ntBASIC17.78■□□□□ 0.44
Tnfrsf17O88472 Gm44549-201ENSMUST00000208351 577 ntBASIC17.78■□□□□ 0.44
Tnfrsf17O88472 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.78■□□□□ 0.44
Tnfrsf17O88472 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Tnfrsf17O88472 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf17O88472 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Tnfrsf17O88472 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf17O88472 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf17O88472 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf17O88472 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Tnfrsf17O88472 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.77■□□□□ 0.44
Tnfrsf17O88472 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Tnfrsf17O88472 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf17O88472 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
Tnfrsf17O88472 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Tnfrsf17O88472 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tnfrsf17O88472 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf17O88472 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf17O88472 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.76■□□□□ 0.43
Tnfrsf17O88472 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf17O88472 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf17O88472 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf17O88472 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Tnfrsf17O88472 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf17O88472 Gm7860-201ENSMUST00000121190 879 ntBASIC17.75■□□□□ 0.43
Tnfrsf17O88472 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Tnfrsf17O88472 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.75■□□□□ 0.43
Tnfrsf17O88472 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.75■□□□□ 0.43
Tnfrsf17O88472 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.75■□□□□ 0.43
Tnfrsf17O88472 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Tnfrsf17O88472 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf17O88472 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf17O88472 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.75■□□□□ 0.43
Tnfrsf17O88472 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf17O88472 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Tnfrsf17O88472 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf17O88472 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf17O88472 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf17O88472 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf17O88472 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf17O88472 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf17O88472 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf17O88472 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.74■□□□□ 0.43
Tnfrsf17O88472 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf17O88472 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Tnfrsf17O88472 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Tnfrsf17O88472 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Tnfrsf17O88472 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Tnfrsf17O88472 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf17O88472 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf17O88472 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Tnfrsf17O88472 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf17O88472 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf17O88472 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Tnfrsf17O88472 Gm13158-201ENSMUST00000122007 736 ntBASIC17.73■□□□□ 0.43
Tnfrsf17O88472 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf17O88472 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf17O88472 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf17O88472 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf17O88472 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf17O88472 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf17O88472 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.72■□□□□ 0.43
Tnfrsf17O88472 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf17O88472 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf17O88472 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf17O88472 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf17O88472 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf17O88472 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf17O88472 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.72■□□□□ 0.43
Tnfrsf17O88472 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf17O88472 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf17O88472 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Tnfrsf17O88472 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tnfrsf17O88472 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf17O88472 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tnfrsf17O88472 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf17O88472 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Tnfrsf17O88472 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf17O88472 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf17O88472 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.71■□□□□ 0.43
Tnfrsf17O88472 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf17O88472 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf17O88472 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf17O88472 Gm10517-202ENSMUST00000192970 758 ntBASIC17.71■□□□□ 0.43
Tnfrsf17O88472 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf17O88472 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Tnfrsf17O88472 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf17O88472 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Tnfrsf17O88472 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf17O88472 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.7■□□□□ 0.42
Tnfrsf17O88472 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.7■□□□□ 0.42
Tnfrsf17O88472 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Tnfrsf17O88472 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf17O88472 Gm6659-201ENSMUST00000174752 547 ntBASIC17.7■□□□□ 0.42
Tnfrsf17O88472 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.7■□□□□ 0.42
Tnfrsf17O88472 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf17O88472 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.7■□□□□ 0.42
Tnfrsf17O88472 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms