Protein–RNA interactions for Protein: O70576

Stag3, Cohesin subunit SA-3, mousemouse

Predictions only

Length 1,240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag3O70576 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Stag3O70576 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Stag3O70576 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Stag3O70576 Gm37856-201ENSMUST00000191634 999 ntBASIC26.31■■□□□ 1.8
Stag3O70576 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Stag3O70576 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Stag3O70576 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Stag3O70576 Rab3c-203ENSMUST00000224180 967 ntBASIC26.3■■□□□ 1.8
Stag3O70576 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Stag3O70576 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Stag3O70576 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Stag3O70576 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Stag3O70576 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Stag3O70576 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Stag3O70576 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Stag3O70576 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Stag3O70576 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Stag3O70576 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Stag3O70576 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Stag3O70576 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Stag3O70576 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC26.29■■□□□ 1.8
Stag3O70576 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Stag3O70576 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Stag3O70576 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Stag3O70576 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Stag3O70576 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
Stag3O70576 Gm13168-201ENSMUST00000121771 632 ntBASIC26.28■■□□□ 1.8
Stag3O70576 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC26.28■■□□□ 1.8
Stag3O70576 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Stag3O70576 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC26.28■■□□□ 1.8
Stag3O70576 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Stag3O70576 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC26.28■■□□□ 1.8
Stag3O70576 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Stag3O70576 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Stag3O70576 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Stag3O70576 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC26.27■■□□□ 1.8
Stag3O70576 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC26.27■■□□□ 1.8
Stag3O70576 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Stag3O70576 Gm13509-201ENSMUST00000119733 1308 ntBASIC26.27■■□□□ 1.8
Stag3O70576 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Stag3O70576 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Stag3O70576 Gm43006-201ENSMUST00000197702 1602 ntBASIC26.27■■□□□ 1.8
Stag3O70576 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Stag3O70576 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC26.27■■□□□ 1.8
Stag3O70576 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC26.26■■□□□ 1.79
Stag3O70576 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Stag3O70576 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Stag3O70576 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Stag3O70576 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Stag3O70576 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
Stag3O70576 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC26.26■■□□□ 1.79
Stag3O70576 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Stag3O70576 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Stag3O70576 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
Stag3O70576 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Stag3O70576 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Stag3O70576 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Stag3O70576 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Stag3O70576 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Stag3O70576 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Stag3O70576 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Stag3O70576 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Stag3O70576 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
Stag3O70576 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Stag3O70576 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC26.24■■□□□ 1.79
Stag3O70576 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC26.24■■□□□ 1.79
Stag3O70576 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Stag3O70576 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Stag3O70576 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Stag3O70576 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC26.24■■□□□ 1.79
Stag3O70576 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Stag3O70576 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC26.23■■□□□ 1.79
Stag3O70576 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Stag3O70576 Trmt13-210ENSMUST00000198454 880 ntBASIC26.23■■□□□ 1.79
Stag3O70576 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Stag3O70576 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Stag3O70576 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Stag3O70576 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Stag3O70576 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
Stag3O70576 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Stag3O70576 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Stag3O70576 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC26.22■■□□□ 1.79
Stag3O70576 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Stag3O70576 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Stag3O70576 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
Stag3O70576 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Stag3O70576 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC26.21■■□□□ 1.79
Stag3O70576 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Stag3O70576 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Stag3O70576 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Stag3O70576 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Stag3O70576 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Stag3O70576 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Stag3O70576 Gm6277-202ENSMUST00000224036 2779 ntBASIC26.2■■□□□ 1.79
Stag3O70576 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
Stag3O70576 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Stag3O70576 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC26.2■■□□□ 1.78
Stag3O70576 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC26.19■■□□□ 1.78
Stag3O70576 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Stag3O70576 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms