Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Prom1O54990 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prom1O54990 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prom1O54990 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.13■□□□□ 0.97
Prom1O54990 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prom1O54990 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prom1O54990 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prom1O54990 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prom1O54990 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prom1O54990 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Prom1O54990 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Prom1O54990 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.12■□□□□ 0.97
Prom1O54990 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Prom1O54990 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prom1O54990 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prom1O54990 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prom1O54990 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prom1O54990 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.12■□□□□ 0.97
Prom1O54990 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prom1O54990 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Prom1O54990 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Prom1O54990 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prom1O54990 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.11■□□□□ 0.97
Prom1O54990 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prom1O54990 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.11■□□□□ 0.97
Prom1O54990 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.11■□□□□ 0.97
Prom1O54990 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Prom1O54990 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prom1O54990 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prom1O54990 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prom1O54990 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prom1O54990 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prom1O54990 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Prom1O54990 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Prom1O54990 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Prom1O54990 Gm12896-201ENSMUST00000118430 226 ntBASIC21.1■□□□□ 0.97
Prom1O54990 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Prom1O54990 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prom1O54990 Gm10812-201ENSMUST00000099864 546 ntBASIC21.1■□□□□ 0.97
Prom1O54990 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prom1O54990 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prom1O54990 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Prom1O54990 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prom1O54990 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prom1O54990 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prom1O54990 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Prom1O54990 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prom1O54990 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prom1O54990 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Prom1O54990 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Prom1O54990 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prom1O54990 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Prom1O54990 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.09■□□□□ 0.97
Prom1O54990 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prom1O54990 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prom1O54990 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Prom1O54990 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Prom1O54990 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Prom1O54990 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prom1O54990 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prom1O54990 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Prom1O54990 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prom1O54990 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Prom1O54990 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.08■□□□□ 0.96
Prom1O54990 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prom1O54990 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Prom1O54990 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Prom1O54990 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.07■□□□□ 0.96
Prom1O54990 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prom1O54990 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Prom1O54990 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Prom1O54990 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prom1O54990 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Prom1O54990 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prom1O54990 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Prom1O54990 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.07■□□□□ 0.96
Prom1O54990 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prom1O54990 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.06■□□□□ 0.96
Prom1O54990 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prom1O54990 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Prom1O54990 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.06■□□□□ 0.96
Prom1O54990 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prom1O54990 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Prom1O54990 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prom1O54990 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prom1O54990 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prom1O54990 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prom1O54990 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Prom1O54990 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prom1O54990 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prom1O54990 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.05■□□□□ 0.96
Prom1O54990 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Prom1O54990 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prom1O54990 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Prom1O54990 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prom1O54990 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Prom1O54990 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Prom1O54990 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prom1O54990 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prom1O54990 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms