Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Tnfsf11O35235 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.87□□□□□ -0.03
Tnfsf11O35235 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Tnfsf11O35235 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf11O35235 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Tnfsf11O35235 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf11O35235 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf11O35235 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf11O35235 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf11O35235 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Tnfsf11O35235 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf11O35235 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf11O35235 Gm13238-201ENSMUST00000117655 780 ntBASIC14.86□□□□□ -0.03
Tnfsf11O35235 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf11O35235 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf11O35235 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Tnfsf11O35235 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf11O35235 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Tnfsf11O35235 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf11O35235 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf11O35235 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf11O35235 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf11O35235 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf11O35235 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf11O35235 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Tnfsf11O35235 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf11O35235 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf11O35235 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf11O35235 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Tnfsf11O35235 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf11O35235 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf11O35235 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf11O35235 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf11O35235 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf11O35235 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf11O35235 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Tnfsf11O35235 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.85□□□□□ -0.03
Tnfsf11O35235 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf11O35235 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf11O35235 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf11O35235 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf11O35235 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf11O35235 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf11O35235 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf11O35235 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Tnfsf11O35235 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf11O35235 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf11O35235 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
Tnfsf11O35235 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf11O35235 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf11O35235 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf11O35235 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf11O35235 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf11O35235 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf11O35235 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf11O35235 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf11O35235 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf11O35235 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Tnfsf11O35235 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf11O35235 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf11O35235 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tnfsf11O35235 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf11O35235 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf11O35235 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Tnfsf11O35235 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf11O35235 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf11O35235 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.83□□□□□ -0.04
Tnfsf11O35235 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.83□□□□□ -0.04
Tnfsf11O35235 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf11O35235 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf11O35235 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf11O35235 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf11O35235 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf11O35235 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf11O35235 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf11O35235 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf11O35235 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.82□□□□□ -0.04
Tnfsf11O35235 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf11O35235 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf11O35235 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf11O35235 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Tnfsf11O35235 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf11O35235 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Tnfsf11O35235 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf11O35235 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Tnfsf11O35235 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf11O35235 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf11O35235 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf11O35235 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.81□□□□□ -0.04
Tnfsf11O35235 Gm43530-201ENSMUST00000195920 274 ntBASIC14.81□□□□□ -0.04
Tnfsf11O35235 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf11O35235 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.81□□□□□ -0.04
Tnfsf11O35235 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf11O35235 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf11O35235 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf11O35235 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf11O35235 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf11O35235 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf11O35235 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf11O35235 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms