Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cx3cl1O35188 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.83■□□□□ 0.45
Cx3cl1O35188 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cx3cl1O35188 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cx3cl1O35188 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cx3cl1O35188 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.83■□□□□ 0.44
Cx3cl1O35188 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.83■□□□□ 0.44
Cx3cl1O35188 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cx3cl1O35188 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cx3cl1O35188 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Cx3cl1O35188 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cx3cl1O35188 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.83■□□□□ 0.44
Cx3cl1O35188 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cx3cl1O35188 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cx3cl1O35188 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cx3cl1O35188 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cx3cl1O35188 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.82■□□□□ 0.44
Cx3cl1O35188 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cx3cl1O35188 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cx3cl1O35188 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.82■□□□□ 0.44
Cx3cl1O35188 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cx3cl1O35188 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.82■□□□□ 0.44
Cx3cl1O35188 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cx3cl1O35188 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cx3cl1O35188 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cx3cl1O35188 Gm42778-201ENSMUST00000199644 553 ntBASIC17.82■□□□□ 0.44
Cx3cl1O35188 Gm42642-201ENSMUST00000200683 355 ntBASIC17.82■□□□□ 0.44
Cx3cl1O35188 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cx3cl1O35188 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cx3cl1O35188 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cx3cl1O35188 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.82■□□□□ 0.44
Cx3cl1O35188 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cx3cl1O35188 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cx3cl1O35188 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cx3cl1O35188 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.81■□□□□ 0.44
Cx3cl1O35188 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cx3cl1O35188 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.81■□□□□ 0.44
Cx3cl1O35188 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cx3cl1O35188 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cx3cl1O35188 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cx3cl1O35188 Reep4-203ENSMUST00000226563 1444 ntBASIC17.81■□□□□ 0.44
Cx3cl1O35188 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.8■□□□□ 0.44
Cx3cl1O35188 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
Cx3cl1O35188 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cx3cl1O35188 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cx3cl1O35188 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cx3cl1O35188 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.8■□□□□ 0.44
Cx3cl1O35188 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cx3cl1O35188 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cx3cl1O35188 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cx3cl1O35188 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cx3cl1O35188 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cx3cl1O35188 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cx3cl1O35188 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cx3cl1O35188 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cx3cl1O35188 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cx3cl1O35188 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cx3cl1O35188 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cx3cl1O35188 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.79■□□□□ 0.44
Cx3cl1O35188 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cx3cl1O35188 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cx3cl1O35188 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.79■□□□□ 0.44
Cx3cl1O35188 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cx3cl1O35188 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cx3cl1O35188 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cx3cl1O35188 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Cx3cl1O35188 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cx3cl1O35188 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cx3cl1O35188 Gm13234-201ENSMUST00000120010 747 ntBASIC17.78■□□□□ 0.44
Cx3cl1O35188 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cx3cl1O35188 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cx3cl1O35188 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.78■□□□□ 0.44
Cx3cl1O35188 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cx3cl1O35188 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cx3cl1O35188 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Cx3cl1O35188 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.78■□□□□ 0.44
Cx3cl1O35188 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cx3cl1O35188 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cx3cl1O35188 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cx3cl1O35188 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Cx3cl1O35188 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cx3cl1O35188 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cx3cl1O35188 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cx3cl1O35188 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cx3cl1O35188 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Cx3cl1O35188 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.77■□□□□ 0.44
Cx3cl1O35188 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.77■□□□□ 0.44
Cx3cl1O35188 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cx3cl1O35188 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cx3cl1O35188 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cx3cl1O35188 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cx3cl1O35188 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cx3cl1O35188 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cx3cl1O35188 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cx3cl1O35188 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cx3cl1O35188 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cx3cl1O35188 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cx3cl1O35188 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cx3cl1O35188 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cx3cl1O35188 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms