Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pkd1O08852 Gm6659-201ENSMUST00000174752 547 ntBASIC12.26□□□□□ -0.45
Pkd1O08852 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.26□□□□□ -0.45
Pkd1O08852 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pkd1O08852 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pkd1O08852 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.26□□□□□ -0.45
Pkd1O08852 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pkd1O08852 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pkd1O08852 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pkd1O08852 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pkd1O08852 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pkd1O08852 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pkd1O08852 Gm15043-201ENSMUST00000118843 1543 ntBASIC12.26□□□□□ -0.45
Pkd1O08852 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pkd1O08852 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pkd1O08852 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pkd1O08852 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pkd1O08852 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pkd1O08852 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.26□□□□□ -0.45
Pkd1O08852 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.26□□□□□ -0.45
Pkd1O08852 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC12.26□□□□□ -0.45
Pkd1O08852 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pkd1O08852 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pkd1O08852 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pkd1O08852 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pkd1O08852 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pkd1O08852 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pkd1O08852 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pkd1O08852 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pkd1O08852 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pkd1O08852 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.25□□□□□ -0.45
Pkd1O08852 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pkd1O08852 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.25□□□□□ -0.45
Pkd1O08852 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pkd1O08852 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pkd1O08852 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pkd1O08852 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC12.25□□□□□ -0.45
Pkd1O08852 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pkd1O08852 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.25□□□□□ -0.45
Pkd1O08852 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.25□□□□□ -0.45
Pkd1O08852 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pkd1O08852 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pkd1O08852 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pkd1O08852 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pkd1O08852 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pkd1O08852 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pkd1O08852 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pkd1O08852 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pkd1O08852 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pkd1O08852 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pkd1O08852 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.24□□□□□ -0.45
Pkd1O08852 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pkd1O08852 Gm5417-201ENSMUST00000079706 384 ntBASIC12.24□□□□□ -0.45
Pkd1O08852 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Pkd1O08852 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.24□□□□□ -0.45
Pkd1O08852 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pkd1O08852 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pkd1O08852 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pkd1O08852 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pkd1O08852 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pkd1O08852 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pkd1O08852 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pkd1O08852 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pkd1O08852 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pkd1O08852 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC12.23□□□□□ -0.45
Pkd1O08852 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pkd1O08852 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pkd1O08852 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pkd1O08852 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pkd1O08852 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pkd1O08852 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC12.23□□□□□ -0.45
Pkd1O08852 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.23□□□□□ -0.45
Pkd1O08852 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pkd1O08852 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pkd1O08852 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.23□□□□□ -0.45
Pkd1O08852 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pkd1O08852 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pkd1O08852 Gm7367-201ENSMUST00000057611 492 ntBASIC12.23□□□□□ -0.45
Pkd1O08852 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pkd1O08852 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pkd1O08852 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pkd1O08852 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.23□□□□□ -0.45
Pkd1O08852 Gm21814-202ENSMUST00000203277 873 ntBASIC12.23□□□□□ -0.45
Pkd1O08852 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.23□□□□□ -0.45
Pkd1O08852 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pkd1O08852 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pkd1O08852 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC12.22□□□□□ -0.45
Pkd1O08852 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pkd1O08852 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC12.22□□□□□ -0.45
Pkd1O08852 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.22□□□□□ -0.45
Pkd1O08852 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pkd1O08852 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Pkd1O08852 Gm43672-201ENSMUST00000199072 1731 ntBASIC12.22□□□□□ -0.45
Pkd1O08852 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pkd1O08852 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pkd1O08852 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pkd1O08852 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pkd1O08852 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pkd1O08852 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pkd1O08852 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms