Protein–RNA interactions for Protein: J3QM76

Ccdc179, Coiled-coil domain-containing protein 179, mousemouse

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc179J3QM76 Gm37035-201ENSMUST00000194809 2148 ntBASIC12.07□□□□□ -0.48
Ccdc179J3QM76 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc179J3QM76 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc179J3QM76 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc179J3QM76 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC12.06□□□□□ -0.48
Ccdc179J3QM76 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc179J3QM76 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc179J3QM76 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc179J3QM76 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc179J3QM76 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc179J3QM76 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc179J3QM76 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc179J3QM76 Gm7160-202ENSMUST00000188519 1027 ntBASIC12.06□□□□□ -0.48
Ccdc179J3QM76 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc179J3QM76 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc179J3QM76 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Ccdc179J3QM76 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Ccdc179J3QM76 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc179J3QM76 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc179J3QM76 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc179J3QM76 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc179J3QM76 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc179J3QM76 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc179J3QM76 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc179J3QM76 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc179J3QM76 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc179J3QM76 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc179J3QM76 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc179J3QM76 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc179J3QM76 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Ccdc179J3QM76 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC12.05□□□□□ -0.48
Ccdc179J3QM76 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc179J3QM76 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc179J3QM76 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc179J3QM76 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc179J3QM76 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc179J3QM76 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc179J3QM76 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc179J3QM76 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc179J3QM76 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc179J3QM76 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Ccdc179J3QM76 Gm10209-201ENSMUST00000203397 1607 ntBASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 AC140930.3-201ENSMUST00000222935 274 ntBASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Hsf1-207ENSMUST00000228371 2102 ntBASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc179J3QM76 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc179J3QM76 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.03□□□□□ -0.48
Ccdc179J3QM76 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc179J3QM76 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc179J3QM76 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc179J3QM76 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc179J3QM76 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc179J3QM76 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.03□□□□□ -0.48
Ccdc179J3QM76 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ccdc179J3QM76 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Ccdc179J3QM76 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc179J3QM76 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc179J3QM76 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc179J3QM76 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Ccdc179J3QM76 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc179J3QM76 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc179J3QM76 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Ccdc179J3QM76 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc179J3QM76 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc179J3QM76 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc179J3QM76 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc179J3QM76 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc179J3QM76 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc179J3QM76 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc179J3QM76 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc179J3QM76 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc179J3QM76 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc179J3QM76 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc179J3QM76 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc179J3QM76 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc179J3QM76 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc179J3QM76 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms