Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TprF6ZDS4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TprF6ZDS4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TprF6ZDS4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.5■□□□□ 0.39
TprF6ZDS4 Gm27275-201ENSMUST00000184318 272 ntBASIC17.5■□□□□ 0.39
TprF6ZDS4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TprF6ZDS4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TprF6ZDS4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TprF6ZDS4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TprF6ZDS4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TprF6ZDS4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.49■□□□□ 0.39
TprF6ZDS4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TprF6ZDS4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TprF6ZDS4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TprF6ZDS4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TprF6ZDS4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TprF6ZDS4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.49■□□□□ 0.39
TprF6ZDS4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TprF6ZDS4 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.49■□□□□ 0.39
TprF6ZDS4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TprF6ZDS4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TprF6ZDS4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.49■□□□□ 0.39
TprF6ZDS4 Gm10517-202ENSMUST00000192970 758 ntBASIC17.49■□□□□ 0.39
TprF6ZDS4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TprF6ZDS4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TprF6ZDS4 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.49■□□□□ 0.39
TprF6ZDS4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TprF6ZDS4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TprF6ZDS4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TprF6ZDS4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TprF6ZDS4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TprF6ZDS4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TprF6ZDS4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
TprF6ZDS4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TprF6ZDS4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TprF6ZDS4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TprF6ZDS4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.48■□□□□ 0.39
TprF6ZDS4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TprF6ZDS4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TprF6ZDS4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TprF6ZDS4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TprF6ZDS4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TprF6ZDS4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TprF6ZDS4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TprF6ZDS4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TprF6ZDS4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TprF6ZDS4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TprF6ZDS4 Gm11249-201ENSMUST00000117071 859 ntBASIC17.47■□□□□ 0.39
TprF6ZDS4 Gm6433-201ENSMUST00000118634 875 ntBASIC17.47■□□□□ 0.39
TprF6ZDS4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TprF6ZDS4 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.47■□□□□ 0.39
TprF6ZDS4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TprF6ZDS4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TprF6ZDS4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TprF6ZDS4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TprF6ZDS4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TprF6ZDS4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.47■□□□□ 0.39
TprF6ZDS4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TprF6ZDS4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TprF6ZDS4 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.47■□□□□ 0.39
TprF6ZDS4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TprF6ZDS4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TprF6ZDS4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TprF6ZDS4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TprF6ZDS4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TprF6ZDS4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TprF6ZDS4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
TprF6ZDS4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
TprF6ZDS4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TprF6ZDS4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TprF6ZDS4 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TprF6ZDS4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TprF6ZDS4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TprF6ZDS4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.45■□□□□ 0.38
TprF6ZDS4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.45■□□□□ 0.38
TprF6ZDS4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TprF6ZDS4 Gm10231-201ENSMUST00000181584 441 ntBASIC17.45■□□□□ 0.38
TprF6ZDS4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TprF6ZDS4 Gm10175-202ENSMUST00000208752 441 ntBASIC17.45■□□□□ 0.38
TprF6ZDS4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TprF6ZDS4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TprF6ZDS4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TprF6ZDS4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.44■□□□□ 0.38
TprF6ZDS4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TprF6ZDS4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TprF6ZDS4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TprF6ZDS4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TprF6ZDS4 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.44■□□□□ 0.38
TprF6ZDS4 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.44■□□□□ 0.38
TprF6ZDS4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TprF6ZDS4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TprF6ZDS4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TprF6ZDS4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TprF6ZDS4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TprF6ZDS4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TprF6ZDS4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TprF6ZDS4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TprF6ZDS4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TprF6ZDS4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TprF6ZDS4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms