Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm28043E0CXC2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm28043E0CXC2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm28043E0CXC2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm28043E0CXC2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Gm28043E0CXC2 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.02■□□□□ 0.63
Gm28043E0CXC2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Gm28043E0CXC2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm28043E0CXC2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm28043E0CXC2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm28043E0CXC2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm28043E0CXC2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm28043E0CXC2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm28043E0CXC2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Gm28043E0CXC2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
Gm28043E0CXC2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Gm28043E0CXC2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Gm28043E0CXC2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm28043E0CXC2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm28043E0CXC2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm28043E0CXC2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Gm28043E0CXC2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm28043E0CXC2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm28043E0CXC2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Gm28043E0CXC2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm28043E0CXC2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Gm28043E0CXC2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Gm28043E0CXC2 Gm5576-201ENSMUST00000075809 1236 ntBASIC19■□□□□ 0.63
Gm28043E0CXC2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm28043E0CXC2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19■□□□□ 0.63
Gm28043E0CXC2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Gm28043E0CXC2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm28043E0CXC2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm28043E0CXC2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19■□□□□ 0.63
Gm28043E0CXC2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19■□□□□ 0.63
Gm28043E0CXC2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm28043E0CXC2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.99■□□□□ 0.63
Gm28043E0CXC2 Gm12821-201ENSMUST00000120022 600 ntBASIC18.99■□□□□ 0.63
Gm28043E0CXC2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm28043E0CXC2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm28043E0CXC2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Gm28043E0CXC2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm28043E0CXC2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Gm28043E0CXC2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Gm28043E0CXC2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm28043E0CXC2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm28043E0CXC2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Gm28043E0CXC2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Gm28043E0CXC2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm28043E0CXC2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm28043E0CXC2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Gm28043E0CXC2 Gm43137-201ENSMUST00000198052 594 ntBASIC18.98■□□□□ 0.63
Gm28043E0CXC2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Gm28043E0CXC2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm28043E0CXC2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm28043E0CXC2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm28043E0CXC2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm28043E0CXC2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm28043E0CXC2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Gm28043E0CXC2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm28043E0CXC2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm28043E0CXC2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm28043E0CXC2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm28043E0CXC2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm28043E0CXC2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.97■□□□□ 0.63
Gm28043E0CXC2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.97■□□□□ 0.63
Gm28043E0CXC2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm28043E0CXC2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm28043E0CXC2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Gm28043E0CXC2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Gm28043E0CXC2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm28043E0CXC2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Gm28043E0CXC2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gm28043E0CXC2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Gm28043E0CXC2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gm28043E0CXC2 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.96■□□□□ 0.63
Gm28043E0CXC2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gm28043E0CXC2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm28043E0CXC2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gm28043E0CXC2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm28043E0CXC2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gm28043E0CXC2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm28043E0CXC2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.96■□□□□ 0.63
Gm28043E0CXC2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm28043E0CXC2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm28043E0CXC2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm28043E0CXC2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm28043E0CXC2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm28043E0CXC2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm28043E0CXC2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Gm28043E0CXC2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm28043E0CXC2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.95■□□□□ 0.62
Gm28043E0CXC2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm28043E0CXC2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Gm28043E0CXC2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Gm28043E0CXC2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm28043E0CXC2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Gm28043E0CXC2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Gm28043E0CXC2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Gm28043E0CXC2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms