Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx8D3YU81 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx8D3YU81 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx8D3YU81 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx8D3YU81 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
Rfx8D3YU81 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx8D3YU81 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx8D3YU81 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx8D3YU81 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Rfx8D3YU81 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfx8D3YU81 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfx8D3YU81 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rfx8D3YU81 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.12■□□□□ 0.81
Rfx8D3YU81 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rfx8D3YU81 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfx8D3YU81 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx8D3YU81 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx8D3YU81 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx8D3YU81 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx8D3YU81 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.11■□□□□ 0.81
Rfx8D3YU81 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx8D3YU81 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rfx8D3YU81 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx8D3YU81 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rfx8D3YU81 Gm10493-201ENSMUST00000097270 612 ntBASIC20.11■□□□□ 0.81
Rfx8D3YU81 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.11■□□□□ 0.81
Rfx8D3YU81 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx8D3YU81 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx8D3YU81 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.11■□□□□ 0.81
Rfx8D3YU81 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx8D3YU81 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx8D3YU81 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx8D3YU81 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx8D3YU81 Golph3-205ENSMUST00000228671 2842 ntBASIC20.1■□□□□ 0.81
Rfx8D3YU81 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Rfx8D3YU81 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
Rfx8D3YU81 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.1■□□□□ 0.81
Rfx8D3YU81 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx8D3YU81 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Rfx8D3YU81 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx8D3YU81 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx8D3YU81 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx8D3YU81 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx8D3YU81 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rfx8D3YU81 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx8D3YU81 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Rfx8D3YU81 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx8D3YU81 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx8D3YU81 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.09■□□□□ 0.81
Rfx8D3YU81 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx8D3YU81 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx8D3YU81 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx8D3YU81 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Rfx8D3YU81 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.09■□□□□ 0.81
Rfx8D3YU81 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.09■□□□□ 0.81
Rfx8D3YU81 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.09■□□□□ 0.81
Rfx8D3YU81 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.09■□□□□ 0.81
Rfx8D3YU81 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.09■□□□□ 0.81
Rfx8D3YU81 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx8D3YU81 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx8D3YU81 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx8D3YU81 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx8D3YU81 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Rfx8D3YU81 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx8D3YU81 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rfx8D3YU81 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfx8D3YU81 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rfx8D3YU81 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfx8D3YU81 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.08■□□□□ 0.81
Rfx8D3YU81 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.08■□□□□ 0.81
Rfx8D3YU81 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfx8D3YU81 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfx8D3YU81 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rfx8D3YU81 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rfx8D3YU81 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx8D3YU81 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Rfx8D3YU81 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx8D3YU81 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx8D3YU81 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.07■□□□□ 0.8
Rfx8D3YU81 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.07■□□□□ 0.8
Rfx8D3YU81 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.07■□□□□ 0.8
Rfx8D3YU81 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx8D3YU81 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.07■□□□□ 0.8
Rfx8D3YU81 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx8D3YU81 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.07■□□□□ 0.8
Rfx8D3YU81 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx8D3YU81 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Rfx8D3YU81 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx8D3YU81 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx8D3YU81 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.06■□□□□ 0.8
Rfx8D3YU81 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfx8D3YU81 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfx8D3YU81 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.06■□□□□ 0.8
Rfx8D3YU81 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.06■□□□□ 0.8
Rfx8D3YU81 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfx8D3YU81 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rfx8D3YU81 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rfx8D3YU81 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx8D3YU81 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx8D3YU81 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms