Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12d-1A0N8R0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12d-1A0N8R0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12d-1A0N8R0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12d-1A0N8R0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav12d-1A0N8R0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12d-1A0N8R0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav12d-1A0N8R0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav12d-1A0N8R0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Trav12d-1A0N8R0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12d-1A0N8R0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.31■□□□□ 0.04
Trav12d-1A0N8R0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.31■□□□□ 0.04
Trav12d-1A0N8R0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12d-1A0N8R0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12d-1A0N8R0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12d-1A0N8R0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12d-1A0N8R0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12d-1A0N8R0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12d-1A0N8R0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12d-1A0N8R0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12d-1A0N8R0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav12d-1A0N8R0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12d-1A0N8R0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12d-1A0N8R0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12d-1A0N8R0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav12d-1A0N8R0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12d-1A0N8R0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12d-1A0N8R0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav12d-1A0N8R0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12d-1A0N8R0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12d-1A0N8R0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12d-1A0N8R0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12d-1A0N8R0 Gm5812-201ENSMUST00000061073 957 ntBASIC15.3■□□□□ 0.04
Trav12d-1A0N8R0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Trav12d-1A0N8R0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12d-1A0N8R0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12d-1A0N8R0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12d-1A0N8R0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12d-1A0N8R0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12d-1A0N8R0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12d-1A0N8R0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trav12d-1A0N8R0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12d-1A0N8R0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12d-1A0N8R0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
Trav12d-1A0N8R0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav12d-1A0N8R0 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.29■□□□□ 0.04
Trav12d-1A0N8R0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12d-1A0N8R0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav12d-1A0N8R0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12d-1A0N8R0 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.29■□□□□ 0.04
Trav12d-1A0N8R0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav12d-1A0N8R0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12d-1A0N8R0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12d-1A0N8R0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12d-1A0N8R0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12d-1A0N8R0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav12d-1A0N8R0 Gm15546-201ENSMUST00000122095 826 ntBASIC15.28■□□□□ 0.04
Trav12d-1A0N8R0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12d-1A0N8R0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12d-1A0N8R0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12d-1A0N8R0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12d-1A0N8R0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav12d-1A0N8R0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
Trav12d-1A0N8R0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12d-1A0N8R0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12d-1A0N8R0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12d-1A0N8R0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12d-1A0N8R0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12d-1A0N8R0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav12d-1A0N8R0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12d-1A0N8R0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav12d-1A0N8R0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.27■□□□□ 0.04
Trav12d-1A0N8R0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12d-1A0N8R0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav12d-1A0N8R0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav12d-1A0N8R0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav12d-1A0N8R0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.27■□□□□ 0.03
Trav12d-1A0N8R0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav12d-1A0N8R0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12d-1A0N8R0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav12d-1A0N8R0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.26■□□□□ 0.03
Trav12d-1A0N8R0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12d-1A0N8R0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12d-1A0N8R0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12d-1A0N8R0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12d-1A0N8R0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12d-1A0N8R0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12d-1A0N8R0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav12d-1A0N8R0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav12d-1A0N8R0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav12d-1A0N8R0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12d-1A0N8R0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12d-1A0N8R0 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.25■□□□□ 0.03
Trav12d-1A0N8R0 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.25■□□□□ 0.03
Trav12d-1A0N8R0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12d-1A0N8R0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12d-1A0N8R0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12d-1A0N8R0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.25■□□□□ 0.03
Trav12d-1A0N8R0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.25■□□□□ 0.03
Trav12d-1A0N8R0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms