Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm3854A0A1B0GSS6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.13■□□□□ 0.65
Gm3854A0A1B0GSS6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Gm3854A0A1B0GSS6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Gm3854A0A1B0GSS6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Gm3854A0A1B0GSS6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm3854A0A1B0GSS6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm3854A0A1B0GSS6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Gm3854A0A1B0GSS6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Gm3854A0A1B0GSS6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm3854A0A1B0GSS6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm3854A0A1B0GSS6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gm3854A0A1B0GSS6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm3854A0A1B0GSS6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gm3854A0A1B0GSS6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.12■□□□□ 0.65
Gm3854A0A1B0GSS6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gm3854A0A1B0GSS6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm3854A0A1B0GSS6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm3854A0A1B0GSS6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm3854A0A1B0GSS6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.12■□□□□ 0.65
Gm3854A0A1B0GSS6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm3854A0A1B0GSS6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm3854A0A1B0GSS6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm3854A0A1B0GSS6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm3854A0A1B0GSS6 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm3854A0A1B0GSS6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm3854A0A1B0GSS6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Gm3854A0A1B0GSS6 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.11■□□□□ 0.65
Gm3854A0A1B0GSS6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.11■□□□□ 0.65
Gm3854A0A1B0GSS6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Gm3854A0A1B0GSS6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm3854A0A1B0GSS6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gm3854A0A1B0GSS6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm3854A0A1B0GSS6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm3854A0A1B0GSS6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm3854A0A1B0GSS6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm3854A0A1B0GSS6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Gm3854A0A1B0GSS6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm3854A0A1B0GSS6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gm3854A0A1B0GSS6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm3854A0A1B0GSS6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gm3854A0A1B0GSS6 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.09■□□□□ 0.65
Gm3854A0A1B0GSS6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gm3854A0A1B0GSS6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Gm3854A0A1B0GSS6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gm3854A0A1B0GSS6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Gm3854A0A1B0GSS6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gm3854A0A1B0GSS6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.08■□□□□ 0.64
Gm3854A0A1B0GSS6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Gm3854A0A1B0GSS6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gm3854A0A1B0GSS6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Gm3854A0A1B0GSS6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gm3854A0A1B0GSS6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Gm3854A0A1B0GSS6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm3854A0A1B0GSS6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm3854A0A1B0GSS6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm3854A0A1B0GSS6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.07■□□□□ 0.64
Gm3854A0A1B0GSS6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm3854A0A1B0GSS6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.07■□□□□ 0.64
Gm3854A0A1B0GSS6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm3854A0A1B0GSS6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm3854A0A1B0GSS6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm3854A0A1B0GSS6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Gm3854A0A1B0GSS6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Gm3854A0A1B0GSS6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gm3854A0A1B0GSS6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm3854A0A1B0GSS6 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm3854A0A1B0GSS6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.06■□□□□ 0.64
Gm3854A0A1B0GSS6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gm3854A0A1B0GSS6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm3854A0A1B0GSS6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.05■□□□□ 0.64
Gm3854A0A1B0GSS6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm3854A0A1B0GSS6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm3854A0A1B0GSS6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm3854A0A1B0GSS6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm3854A0A1B0GSS6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm3854A0A1B0GSS6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Gm3854A0A1B0GSS6 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.05■□□□□ 0.64
Gm3854A0A1B0GSS6 Gm27275-201ENSMUST00000184318 272 ntBASIC19.05■□□□□ 0.64
Gm3854A0A1B0GSS6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm3854A0A1B0GSS6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm3854A0A1B0GSS6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm3854A0A1B0GSS6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Gm3854A0A1B0GSS6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Gm3854A0A1B0GSS6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm3854A0A1B0GSS6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm3854A0A1B0GSS6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Gm3854A0A1B0GSS6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm3854A0A1B0GSS6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm3854A0A1B0GSS6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm3854A0A1B0GSS6 Gm12896-201ENSMUST00000118430 226 ntBASIC19.04■□□□□ 0.64
Gm3854A0A1B0GSS6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Gm3854A0A1B0GSS6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm3854A0A1B0GSS6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Gm3854A0A1B0GSS6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm3854A0A1B0GSS6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm3854A0A1B0GSS6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm3854A0A1B0GSS6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.03■□□□□ 0.64
Gm3854A0A1B0GSS6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Gm3854A0A1B0GSS6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms