Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm3880A0A1B0GSB3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Gm3880A0A1B0GSB3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm3880A0A1B0GSB3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Gm3880A0A1B0GSB3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm3880A0A1B0GSB3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Gm3880A0A1B0GSB3 Gm43702-201ENSMUST00000198772 2546 ntBASIC9.53□□□□□ -0.88
Gm3880A0A1B0GSB3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Gm3880A0A1B0GSB3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC9.53□□□□□ -0.88
Gm3880A0A1B0GSB3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Gm3880A0A1B0GSB3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm3880A0A1B0GSB3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Gm3880A0A1B0GSB3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm3880A0A1B0GSB3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm3880A0A1B0GSB3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm3880A0A1B0GSB3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Gm3880A0A1B0GSB3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm3880A0A1B0GSB3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC9.53□□□□□ -0.88
Gm3880A0A1B0GSB3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC9.52□□□□□ -0.88
Gm3880A0A1B0GSB3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.88
Gm3880A0A1B0GSB3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Gm3880A0A1B0GSB3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC9.52□□□□□ -0.88
Gm3880A0A1B0GSB3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm3880A0A1B0GSB3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm3880A0A1B0GSB3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm3880A0A1B0GSB3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Gm3880A0A1B0GSB3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm3880A0A1B0GSB3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm3880A0A1B0GSB3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm3880A0A1B0GSB3 Gm27322-201ENSMUST00000184007 104 ntBASIC9.52□□□□□ -0.89
Gm3880A0A1B0GSB3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm3880A0A1B0GSB3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm3880A0A1B0GSB3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC9.52□□□□□ -0.89
Gm3880A0A1B0GSB3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Gm3880A0A1B0GSB3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm3880A0A1B0GSB3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm3880A0A1B0GSB3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm3880A0A1B0GSB3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm3880A0A1B0GSB3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm3880A0A1B0GSB3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm3880A0A1B0GSB3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm3880A0A1B0GSB3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm3880A0A1B0GSB3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm3880A0A1B0GSB3 Gm6627-201ENSMUST00000218299 2386 ntBASIC9.51□□□□□ -0.89
Gm3880A0A1B0GSB3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm3880A0A1B0GSB3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Gm3880A0A1B0GSB3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Gm3880A0A1B0GSB3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Gm3880A0A1B0GSB3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm3880A0A1B0GSB3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC9.51□□□□□ -0.89
Gm3880A0A1B0GSB3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm3880A0A1B0GSB3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm3880A0A1B0GSB3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm3880A0A1B0GSB3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm3880A0A1B0GSB3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC9.51□□□□□ -0.89
Gm3880A0A1B0GSB3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm3880A0A1B0GSB3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm3880A0A1B0GSB3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Gm3880A0A1B0GSB3 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm3880A0A1B0GSB3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm3880A0A1B0GSB3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm3880A0A1B0GSB3 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm3880A0A1B0GSB3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm3880A0A1B0GSB3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Gm3880A0A1B0GSB3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Gm3880A0A1B0GSB3 Gm5421-201ENSMUST00000181698 2354 ntBASIC9.5□□□□□ -0.89
Gm3880A0A1B0GSB3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm3880A0A1B0GSB3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm3880A0A1B0GSB3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm3880A0A1B0GSB3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Gm3880A0A1B0GSB3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC9.5□□□□□ -0.89
Gm3880A0A1B0GSB3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm3880A0A1B0GSB3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Gm3880A0A1B0GSB3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Gm3880A0A1B0GSB3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm3880A0A1B0GSB3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm3880A0A1B0GSB3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm3880A0A1B0GSB3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm3880A0A1B0GSB3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Gm3880A0A1B0GSB3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm3880A0A1B0GSB3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm3880A0A1B0GSB3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC9.49□□□□□ -0.89
Gm3880A0A1B0GSB3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm3880A0A1B0GSB3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Gm3880A0A1B0GSB3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm3880A0A1B0GSB3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm3880A0A1B0GSB3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm3880A0A1B0GSB3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm3880A0A1B0GSB3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Gm3880A0A1B0GSB3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Gm3880A0A1B0GSB3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Gm3880A0A1B0GSB3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Gm3880A0A1B0GSB3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm3880A0A1B0GSB3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm3880A0A1B0GSB3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm3880A0A1B0GSB3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm3880A0A1B0GSB3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Gm3880A0A1B0GSB3 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Gm3880A0A1B0GSB3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC9.49□□□□□ -0.89
Gm3880A0A1B0GSB3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms