Protein–RNA interactions for Protein: A0A140T8N7

Igkv6-25, Immunoglobulin kappa chain variable 6-25 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-25A0A140T8N7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv6-25A0A140T8N7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv6-25A0A140T8N7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.89■□□□□ 0.45
Igkv6-25A0A140T8N7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.89■□□□□ 0.45
Igkv6-25A0A140T8N7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv6-25A0A140T8N7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv6-25A0A140T8N7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv6-25A0A140T8N7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv6-25A0A140T8N7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv6-25A0A140T8N7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv6-25A0A140T8N7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv6-25A0A140T8N7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv6-25A0A140T8N7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Igkv6-25A0A140T8N7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.88■□□□□ 0.45
Igkv6-25A0A140T8N7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.88■□□□□ 0.45
Igkv6-25A0A140T8N7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv6-25A0A140T8N7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.88■□□□□ 0.45
Igkv6-25A0A140T8N7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv6-25A0A140T8N7 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.88■□□□□ 0.45
Igkv6-25A0A140T8N7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Igkv6-25A0A140T8N7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv6-25A0A140T8N7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv6-25A0A140T8N7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Igkv6-25A0A140T8N7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv6-25A0A140T8N7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv6-25A0A140T8N7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.87■□□□□ 0.45
Igkv6-25A0A140T8N7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv6-25A0A140T8N7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv6-25A0A140T8N7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Igkv6-25A0A140T8N7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Igkv6-25A0A140T8N7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv6-25A0A140T8N7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv6-25A0A140T8N7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv6-25A0A140T8N7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv6-25A0A140T8N7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv6-25A0A140T8N7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv6-25A0A140T8N7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv6-25A0A140T8N7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv6-25A0A140T8N7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv6-25A0A140T8N7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv6-25A0A140T8N7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.86■□□□□ 0.45
Igkv6-25A0A140T8N7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv6-25A0A140T8N7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Igkv6-25A0A140T8N7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Igkv6-25A0A140T8N7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Igkv6-25A0A140T8N7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv6-25A0A140T8N7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv6-25A0A140T8N7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv6-25A0A140T8N7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv6-25A0A140T8N7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.85■□□□□ 0.45
Igkv6-25A0A140T8N7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv6-25A0A140T8N7 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.85■□□□□ 0.45
Igkv6-25A0A140T8N7 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.85■□□□□ 0.45
Igkv6-25A0A140T8N7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv6-25A0A140T8N7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv6-25A0A140T8N7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv6-25A0A140T8N7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv6-25A0A140T8N7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv6-25A0A140T8N7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv6-25A0A140T8N7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv6-25A0A140T8N7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Igkv6-25A0A140T8N7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv6-25A0A140T8N7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv6-25A0A140T8N7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv6-25A0A140T8N7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv6-25A0A140T8N7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Igkv6-25A0A140T8N7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv6-25A0A140T8N7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv6-25A0A140T8N7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Igkv6-25A0A140T8N7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv6-25A0A140T8N7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Igkv6-25A0A140T8N7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Igkv6-25A0A140T8N7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Igkv6-25A0A140T8N7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Igkv6-25A0A140T8N7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Igkv6-25A0A140T8N7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.83■□□□□ 0.44
Igkv6-25A0A140T8N7 Gm37856-201ENSMUST00000191634 999 ntBASIC17.83■□□□□ 0.44
Igkv6-25A0A140T8N7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Igkv6-25A0A140T8N7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Igkv6-25A0A140T8N7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Igkv6-25A0A140T8N7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Igkv6-25A0A140T8N7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Igkv6-25A0A140T8N7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Igkv6-25A0A140T8N7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Igkv6-25A0A140T8N7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Igkv6-25A0A140T8N7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv6-25A0A140T8N7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv6-25A0A140T8N7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv6-25A0A140T8N7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.82■□□□□ 0.44
Igkv6-25A0A140T8N7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.82■□□□□ 0.44
Igkv6-25A0A140T8N7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.82■□□□□ 0.44
Igkv6-25A0A140T8N7 Gm8520-201ENSMUST00000186517 868 ntBASIC17.82■□□□□ 0.44
Igkv6-25A0A140T8N7 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.82■□□□□ 0.44
Igkv6-25A0A140T8N7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv6-25A0A140T8N7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv6-25A0A140T8N7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv6-25A0A140T8N7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv6-25A0A140T8N7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv6-25A0A140T8N7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv6-25A0A140T8N7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms