Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-2A0A0G2JF93 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-2A0A0G2JF93 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-2A0A0G2JF93 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-2A0A0G2JF93 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-2A0A0G2JF93 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-2A0A0G2JF93 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-2A0A0G2JF93 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-2A0A0G2JF93 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-2A0A0G2JF93 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-2A0A0G2JF93 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-2A0A0G2JF93 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav13n-2A0A0G2JF93 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-2A0A0G2JF93 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-2A0A0G2JF93 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav13n-2A0A0G2JF93 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-2A0A0G2JF93 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav13n-2A0A0G2JF93 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-2A0A0G2JF93 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-2A0A0G2JF93 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-2A0A0G2JF93 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-2A0A0G2JF93 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-2A0A0G2JF93 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-2A0A0G2JF93 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-2A0A0G2JF93 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-2A0A0G2JF93 Rncr4-201ENSMUST00000194541 2234 ntBASIC12.58□□□□□ -0.39
Trav13n-2A0A0G2JF93 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-2A0A0G2JF93 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav13n-2A0A0G2JF93 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-2A0A0G2JF93 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-2A0A0G2JF93 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-2A0A0G2JF93 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-2A0A0G2JF93 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-2A0A0G2JF93 Gm20100-201ENSMUST00000209418 2272 ntBASIC12.57□□□□□ -0.4
Trav13n-2A0A0G2JF93 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC12.57□□□□□ -0.4
Trav13n-2A0A0G2JF93 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-2A0A0G2JF93 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav13n-2A0A0G2JF93 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-2A0A0G2JF93 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav13n-2A0A0G2JF93 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav13n-2A0A0G2JF93 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-2A0A0G2JF93 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-2A0A0G2JF93 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav13n-2A0A0G2JF93 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-2A0A0G2JF93 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-2A0A0G2JF93 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Trav13n-2A0A0G2JF93 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-2A0A0G2JF93 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-2A0A0G2JF93 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav13n-2A0A0G2JF93 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-2A0A0G2JF93 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-2A0A0G2JF93 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms