Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Gm27801-201ENSMUST00000184174 223 ntBASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Gm26571-201ENSMUST00000181399 666 ntBASIC13.73□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.73□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Gm7291-201ENSMUST00000199147 382 ntBASIC13.73□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13n-1A0A0G2JEU8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms