Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.15□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.15□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.14□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-1A0A0B4J1P8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.14□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.14□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Gm11421-201ENSMUST00000122124 294 ntBASIC14.13□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv13-1A0A0B4J1P8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.12□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.12□□□□□ -0.15
Trbv13-1A0A0B4J1P8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.12□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Gm10493-201ENSMUST00000097270 612 ntBASIC14.12□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.12□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trbv13-1A0A0B4J1P8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.11□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.11□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.11□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.09□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms