Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav19A0A0B4J1K4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav19A0A0B4J1K4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav19A0A0B4J1K4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav19A0A0B4J1K4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Trav19A0A0B4J1K4 Gm7417-201ENSMUST00000192950 473 ntBASIC14.25□□□□□ -0.13
Trav19A0A0B4J1K4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav19A0A0B4J1K4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.25□□□□□ -0.13
Trav19A0A0B4J1K4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav19A0A0B4J1K4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav19A0A0B4J1K4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav19A0A0B4J1K4 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.25□□□□□ -0.13
Trav19A0A0B4J1K4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.25□□□□□ -0.13
Trav19A0A0B4J1K4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav19A0A0B4J1K4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav19A0A0B4J1K4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav19A0A0B4J1K4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav19A0A0B4J1K4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav19A0A0B4J1K4 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.24□□□□□ -0.13
Trav19A0A0B4J1K4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav19A0A0B4J1K4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.24□□□□□ -0.13
Trav19A0A0B4J1K4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav19A0A0B4J1K4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav19A0A0B4J1K4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav19A0A0B4J1K4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav19A0A0B4J1K4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav19A0A0B4J1K4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav19A0A0B4J1K4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav19A0A0B4J1K4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav19A0A0B4J1K4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav19A0A0B4J1K4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav19A0A0B4J1K4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav19A0A0B4J1K4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav19A0A0B4J1K4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav19A0A0B4J1K4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav19A0A0B4J1K4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav19A0A0B4J1K4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav19A0A0B4J1K4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav19A0A0B4J1K4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav19A0A0B4J1K4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav19A0A0B4J1K4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav19A0A0B4J1K4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav19A0A0B4J1K4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav19A0A0B4J1K4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav19A0A0B4J1K4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav19A0A0B4J1K4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav19A0A0B4J1K4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav19A0A0B4J1K4 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.21□□□□□ -0.13
Trav19A0A0B4J1K4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav19A0A0B4J1K4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav19A0A0B4J1K4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav19A0A0B4J1K4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav19A0A0B4J1K4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trav19A0A0B4J1K4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav19A0A0B4J1K4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav19A0A0B4J1K4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav19A0A0B4J1K4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms