Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Gm5874-201ENSMUST00000096101 508 ntBASIC16.89■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.88■□□□□ 0.29
Trbv12-1A0A0B4J1H0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trbv12-1A0A0B4J1H0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Gm13534-201ENSMUST00000121169 513 ntBASIC16.87■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Gm42778-201ENSMUST00000199644 553 ntBASIC16.87■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Trbv12-1A0A0B4J1H0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.86■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Gm10033-202ENSMUST00000211874 928 ntBASIC16.86■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv12-1A0A0B4J1H0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv12-1A0A0B4J1H0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.86■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv12-1A0A0B4J1H0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Gm8495-201ENSMUST00000188740 694 ntBASIC16.85■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.85■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.85■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.84■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Gm42642-201ENSMUST00000200683 355 ntBASIC16.84■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.84■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.84■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Trbv12-1A0A0B4J1H0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trbv12-1A0A0B4J1H0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.83■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.83■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv12-1A0A0B4J1H0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.82■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv12-1A0A0B4J1H0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Trbv12-1A0A0B4J1H0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 127.6 ms