Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
Trbv15A0A0A6YYE3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv15A0A0A6YYE3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv15A0A0A6YYE3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trbv15A0A0A6YYE3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv15A0A0A6YYE3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trbv15A0A0A6YYE3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.82■□□□□ 0.12
Trbv15A0A0A6YYE3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv15A0A0A6YYE3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv15A0A0A6YYE3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trbv15A0A0A6YYE3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
Trbv15A0A0A6YYE3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv15A0A0A6YYE3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv15A0A0A6YYE3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.82■□□□□ 0.12
Trbv15A0A0A6YYE3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv15A0A0A6YYE3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv15A0A0A6YYE3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv15A0A0A6YYE3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv15A0A0A6YYE3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trbv15A0A0A6YYE3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.81■□□□□ 0.12
Trbv15A0A0A6YYE3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv15A0A0A6YYE3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv15A0A0A6YYE3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv15A0A0A6YYE3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv15A0A0A6YYE3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv15A0A0A6YYE3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv15A0A0A6YYE3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv15A0A0A6YYE3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv15A0A0A6YYE3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv15A0A0A6YYE3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv15A0A0A6YYE3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv15A0A0A6YYE3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv15A0A0A6YYE3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv15A0A0A6YYE3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv15A0A0A6YYE3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv15A0A0A6YYE3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv15A0A0A6YYE3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv15A0A0A6YYE3 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.8■□□□□ 0.12
Trbv15A0A0A6YYE3 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.79■□□□□ 0.12
Trbv15A0A0A6YYE3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv15A0A0A6YYE3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv15A0A0A6YYE3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv15A0A0A6YYE3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv15A0A0A6YYE3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv15A0A0A6YYE3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv15A0A0A6YYE3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv15A0A0A6YYE3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.79■□□□□ 0.12
Trbv15A0A0A6YYE3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv15A0A0A6YYE3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trbv15A0A0A6YYE3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv15A0A0A6YYE3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv15A0A0A6YYE3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv15A0A0A6YYE3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv15A0A0A6YYE3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv15A0A0A6YYE3 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.79■□□□□ 0.12
Trbv15A0A0A6YYE3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Trbv15A0A0A6YYE3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv15A0A0A6YYE3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.78■□□□□ 0.12
Trbv15A0A0A6YYE3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.78■□□□□ 0.12
Trbv15A0A0A6YYE3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.78■□□□□ 0.12
Trbv15A0A0A6YYE3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv15A0A0A6YYE3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv15A0A0A6YYE3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv15A0A0A6YYE3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trbv15A0A0A6YYE3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv15A0A0A6YYE3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv15A0A0A6YYE3 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.77■□□□□ 0.12
Trbv15A0A0A6YYE3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv15A0A0A6YYE3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv15A0A0A6YYE3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv15A0A0A6YYE3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv15A0A0A6YYE3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv15A0A0A6YYE3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trbv15A0A0A6YYE3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv15A0A0A6YYE3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv15A0A0A6YYE3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv15A0A0A6YYE3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.77■□□□□ 0.12
Trbv15A0A0A6YYE3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.77■□□□□ 0.12
Trbv15A0A0A6YYE3 Serp2-204ENSMUST00000228055 705 ntBASIC15.77■□□□□ 0.12
Trbv15A0A0A6YYE3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv15A0A0A6YYE3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv15A0A0A6YYE3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv15A0A0A6YYE3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv15A0A0A6YYE3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trbv15A0A0A6YYE3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv15A0A0A6YYE3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv15A0A0A6YYE3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.11
Trbv15A0A0A6YYE3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv15A0A0A6YYE3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv15A0A0A6YYE3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms