Protein–RNA interactions for Protein: A0A087WP44

Gm28897, Predicted gene 28827, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28897A0A087WP44 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28897A0A087WP44 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28897A0A087WP44 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28897A0A087WP44 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28897A0A087WP44 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28897A0A087WP44 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28897A0A087WP44 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28897A0A087WP44 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.84■□□□□ 0.29
Gm28897A0A087WP44 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28897A0A087WP44 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28897A0A087WP44 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Gm28897A0A087WP44 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28897A0A087WP44 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.83■□□□□ 0.28
Gm28897A0A087WP44 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28897A0A087WP44 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Gm28897A0A087WP44 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.83■□□□□ 0.28
Gm28897A0A087WP44 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.83■□□□□ 0.28
Gm28897A0A087WP44 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28897A0A087WP44 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Gm28897A0A087WP44 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28897A0A087WP44 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28897A0A087WP44 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28897A0A087WP44 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28897A0A087WP44 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28897A0A087WP44 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Gm28897A0A087WP44 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28897A0A087WP44 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Gm28897A0A087WP44 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28897A0A087WP44 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.82■□□□□ 0.28
Gm28897A0A087WP44 Cap2-205ENSMUST00000225824 1634 ntBASIC16.82■□□□□ 0.28
Gm28897A0A087WP44 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28897A0A087WP44 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28897A0A087WP44 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Gm28897A0A087WP44 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Gm28897A0A087WP44 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28897A0A087WP44 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28897A0A087WP44 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28897A0A087WP44 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28897A0A087WP44 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28897A0A087WP44 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28897A0A087WP44 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.81■□□□□ 0.28
Gm28897A0A087WP44 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28897A0A087WP44 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28897A0A087WP44 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Gm28897A0A087WP44 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28897A0A087WP44 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.81■□□□□ 0.28
Gm28897A0A087WP44 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28897A0A087WP44 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28897A0A087WP44 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28897A0A087WP44 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Gm28897A0A087WP44 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28897A0A087WP44 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Gm28897A0A087WP44 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28897A0A087WP44 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28897A0A087WP44 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Gm28897A0A087WP44 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Gm28897A0A087WP44 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28897A0A087WP44 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28897A0A087WP44 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28897A0A087WP44 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28897A0A087WP44 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28897A0A087WP44 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28897A0A087WP44 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28897A0A087WP44 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28897A0A087WP44 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.8■□□□□ 0.28
Gm28897A0A087WP44 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28897A0A087WP44 Gm10232-201ENSMUST00000089221 720 ntBASIC16.8■□□□□ 0.28
Gm28897A0A087WP44 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Gm28897A0A087WP44 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.8■□□□□ 0.28
Gm28897A0A087WP44 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28897A0A087WP44 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Gm28897A0A087WP44 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28897A0A087WP44 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28897A0A087WP44 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28897A0A087WP44 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Gm28897A0A087WP44 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28897A0A087WP44 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28897A0A087WP44 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28897A0A087WP44 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28897A0A087WP44 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28897A0A087WP44 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28897A0A087WP44 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28897A0A087WP44 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28897A0A087WP44 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28897A0A087WP44 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28897A0A087WP44 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28897A0A087WP44 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28897A0A087WP44 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.78■□□□□ 0.28
Gm28897A0A087WP44 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28897A0A087WP44 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28897A0A087WP44 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Gm28897A0A087WP44 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28897A0A087WP44 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28897A0A087WP44 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Gm28897A0A087WP44 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm28897A0A087WP44 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm28897A0A087WP44 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.77■□□□□ 0.28
Gm28897A0A087WP44 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm28897A0A087WP44 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm28897A0A087WP44 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms