Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav16A0A075B653 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav16A0A075B653 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16A0A075B653 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16A0A075B653 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16A0A075B653 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16A0A075B653 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16A0A075B653 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav16A0A075B653 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16A0A075B653 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav16A0A075B653 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16A0A075B653 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav16A0A075B653 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16A0A075B653 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16A0A075B653 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16A0A075B653 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16A0A075B653 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav16A0A075B653 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16A0A075B653 Gm43530-201ENSMUST00000195920 274 ntBASIC14.71□□□□□ -0.05
Trav16A0A075B653 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav16A0A075B653 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16A0A075B653 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16A0A075B653 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav16A0A075B653 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav16A0A075B653 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Trav16A0A075B653 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16A0A075B653 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16A0A075B653 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16A0A075B653 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.7□□□□□ -0.06
Trav16A0A075B653 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16A0A075B653 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16A0A075B653 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav16A0A075B653 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav16A0A075B653 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.7□□□□□ -0.06
Trav16A0A075B653 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16A0A075B653 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16A0A075B653 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16A0A075B653 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16A0A075B653 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16A0A075B653 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16A0A075B653 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16A0A075B653 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16A0A075B653 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Trav16A0A075B653 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav16A0A075B653 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.69□□□□□ -0.06
Trav16A0A075B653 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav16A0A075B653 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16A0A075B653 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav16A0A075B653 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16A0A075B653 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav16A0A075B653 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.69□□□□□ -0.06
Trav16A0A075B653 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16A0A075B653 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Trav16A0A075B653 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav16A0A075B653 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16A0A075B653 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Trav16A0A075B653 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16A0A075B653 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16A0A075B653 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16A0A075B653 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav16A0A075B653 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16A0A075B653 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16A0A075B653 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav16A0A075B653 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16A0A075B653 Gm40881-201ENSMUST00000223397 166 ntBASIC14.68□□□□□ -0.06
Trav16A0A075B653 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16A0A075B653 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16A0A075B653 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Trav16A0A075B653 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16A0A075B653 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16A0A075B653 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16A0A075B653 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16A0A075B653 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16A0A075B653 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16A0A075B653 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16A0A075B653 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16A0A075B653 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16A0A075B653 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16A0A075B653 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.67□□□□□ -0.06
Trav16A0A075B653 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav16A0A075B653 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav16A0A075B653 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav16A0A075B653 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav16A0A075B653 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16A0A075B653 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16A0A075B653 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16A0A075B653 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16A0A075B653 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16A0A075B653 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16A0A075B653 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16A0A075B653 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16A0A075B653 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16A0A075B653 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16A0A075B653 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav16A0A075B653 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16A0A075B653 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16A0A075B653 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16A0A075B653 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16A0A075B653 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16A0A075B653 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms