Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav14n-3A0A075B645 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav14n-3A0A075B645 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav14n-3A0A075B645 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav14n-3A0A075B645 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav14n-3A0A075B645 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav14n-3A0A075B645 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav14n-3A0A075B645 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav14n-3A0A075B645 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav14n-3A0A075B645 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav14n-3A0A075B645 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav14n-3A0A075B645 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.41□□□□□ -0.1
Trav14n-3A0A075B645 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav14n-3A0A075B645 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav14n-3A0A075B645 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav14n-3A0A075B645 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav14n-3A0A075B645 AA386476-201ENSMUST00000098781 1665 ntBASIC14.4□□□□□ -0.1
Trav14n-3A0A075B645 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav14n-3A0A075B645 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav14n-3A0A075B645 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav14n-3A0A075B645 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.4□□□□□ -0.1
Trav14n-3A0A075B645 Gm10420-201ENSMUST00000121713 882 ntBASIC14.4□□□□□ -0.1
Trav14n-3A0A075B645 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav14n-3A0A075B645 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav14n-3A0A075B645 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav14n-3A0A075B645 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav14n-3A0A075B645 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav14n-3A0A075B645 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav14n-3A0A075B645 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.4□□□□□ -0.1
Trav14n-3A0A075B645 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav14n-3A0A075B645 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav14n-3A0A075B645 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav14n-3A0A075B645 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav14n-3A0A075B645 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav14n-3A0A075B645 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav14n-3A0A075B645 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav14n-3A0A075B645 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav14n-3A0A075B645 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav14n-3A0A075B645 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav14n-3A0A075B645 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav14n-3A0A075B645 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.39□□□□□ -0.11
Trav14n-3A0A075B645 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav14n-3A0A075B645 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav14n-3A0A075B645 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav14n-3A0A075B645 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav14n-3A0A075B645 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav14n-3A0A075B645 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav14n-3A0A075B645 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav14n-3A0A075B645 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav14n-3A0A075B645 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.39□□□□□ -0.11
Trav14n-3A0A075B645 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trav14n-3A0A075B645 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trav14n-3A0A075B645 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav14n-3A0A075B645 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav14n-3A0A075B645 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav14n-3A0A075B645 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav14n-3A0A075B645 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav14n-3A0A075B645 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav14n-3A0A075B645 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav14n-3A0A075B645 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav14n-3A0A075B645 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav14n-3A0A075B645 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav14n-3A0A075B645 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav14n-3A0A075B645 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav14n-3A0A075B645 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav14n-3A0A075B645 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav14n-3A0A075B645 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav14n-3A0A075B645 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.37□□□□□ -0.11
Trav14n-3A0A075B645 Gm10399-202ENSMUST00000202768 748 ntBASIC14.37□□□□□ -0.11
Trav14n-3A0A075B645 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav14n-3A0A075B645 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav14n-3A0A075B645 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.37□□□□□ -0.11
Trav14n-3A0A075B645 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav14n-3A0A075B645 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav14n-3A0A075B645 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav14n-3A0A075B645 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav14n-3A0A075B645 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav14n-3A0A075B645 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.36□□□□□ -0.11
Trav14n-3A0A075B645 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav14n-3A0A075B645 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav14n-3A0A075B645 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav14n-3A0A075B645 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav14n-3A0A075B645 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav14n-3A0A075B645 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav14n-3A0A075B645 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav14n-3A0A075B645 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav14n-3A0A075B645 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav14n-3A0A075B645 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav14n-3A0A075B645 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav14n-3A0A075B645 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav14n-3A0A075B645 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav14n-3A0A075B645 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav14n-3A0A075B645 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav14n-3A0A075B645 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav14n-3A0A075B645 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav14n-3A0A075B645 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav14n-3A0A075B645 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav14n-3A0A075B645 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav14n-3A0A075B645 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav14n-3A0A075B645 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms