Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8n-2A0A075B633 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8n-2A0A075B633 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8n-2A0A075B633 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8n-2A0A075B633 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav8n-2A0A075B633 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Trav8n-2A0A075B633 Gm22325-201ENSMUST00000158904 308 ntBASIC17.49■□□□□ 0.39
Trav8n-2A0A075B633 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8n-2A0A075B633 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trav8n-2A0A075B633 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8n-2A0A075B633 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trav8n-2A0A075B633 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8n-2A0A075B633 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8n-2A0A075B633 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8n-2A0A075B633 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8n-2A0A075B633 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav8n-2A0A075B633 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav8n-2A0A075B633 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav8n-2A0A075B633 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Trav8n-2A0A075B633 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.48■□□□□ 0.39
Trav8n-2A0A075B633 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.48■□□□□ 0.39
Trav8n-2A0A075B633 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav8n-2A0A075B633 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav8n-2A0A075B633 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Trav8n-2A0A075B633 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav8n-2A0A075B633 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav8n-2A0A075B633 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Trav8n-2A0A075B633 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav8n-2A0A075B633 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav8n-2A0A075B633 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav8n-2A0A075B633 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav8n-2A0A075B633 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav8n-2A0A075B633 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav8n-2A0A075B633 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.47■□□□□ 0.39
Trav8n-2A0A075B633 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trav8n-2A0A075B633 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav8n-2A0A075B633 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav8n-2A0A075B633 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav8n-2A0A075B633 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav8n-2A0A075B633 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trav8n-2A0A075B633 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.47■□□□□ 0.39
Trav8n-2A0A075B633 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav8n-2A0A075B633 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav8n-2A0A075B633 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8n-2A0A075B633 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8n-2A0A075B633 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8n-2A0A075B633 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8n-2A0A075B633 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8n-2A0A075B633 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.46■□□□□ 0.39
Trav8n-2A0A075B633 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8n-2A0A075B633 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.46■□□□□ 0.39
Trav8n-2A0A075B633 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.46■□□□□ 0.39
Trav8n-2A0A075B633 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trav8n-2A0A075B633 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8n-2A0A075B633 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.46■□□□□ 0.39
Trav8n-2A0A075B633 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8n-2A0A075B633 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8n-2A0A075B633 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.46■□□□□ 0.39
Trav8n-2A0A075B633 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8n-2A0A075B633 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav8n-2A0A075B633 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav8n-2A0A075B633 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav8n-2A0A075B633 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav8n-2A0A075B633 Gm6576-201ENSMUST00000169678 883 ntBASIC17.45■□□□□ 0.38
Trav8n-2A0A075B633 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.45■□□□□ 0.38
Trav8n-2A0A075B633 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trav8n-2A0A075B633 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trav8n-2A0A075B633 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav8n-2A0A075B633 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8n-2A0A075B633 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8n-2A0A075B633 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8n-2A0A075B633 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8n-2A0A075B633 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.44■□□□□ 0.38
Trav8n-2A0A075B633 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8n-2A0A075B633 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.44■□□□□ 0.38
Trav8n-2A0A075B633 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8n-2A0A075B633 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8n-2A0A075B633 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.44■□□□□ 0.38
Trav8n-2A0A075B633 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8n-2A0A075B633 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trav8n-2A0A075B633 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8n-2A0A075B633 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8n-2A0A075B633 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8n-2A0A075B633 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8n-2A0A075B633 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.44■□□□□ 0.38
Trav8n-2A0A075B633 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8n-2A0A075B633 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8n-2A0A075B633 Gm5643-201ENSMUST00000117081 966 ntBASIC17.43■□□□□ 0.38
Trav8n-2A0A075B633 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.43■□□□□ 0.38
Trav8n-2A0A075B633 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.43■□□□□ 0.38
Trav8n-2A0A075B633 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8n-2A0A075B633 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8n-2A0A075B633 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8n-2A0A075B633 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8n-2A0A075B633 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8n-2A0A075B633 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8n-2A0A075B633 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8n-2A0A075B633 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8n-2A0A075B633 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8n-2A0A075B633 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms