Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16d-dv11A0A075B617 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav16d-dv11A0A075B617 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Trav16d-dv11A0A075B617 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16d-dv11A0A075B617 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav16d-dv11A0A075B617 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16d-dv11A0A075B617 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16d-dv11A0A075B617 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16d-dv11A0A075B617 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16d-dv11A0A075B617 Gm18688-201ENSMUST00000204695 1859 ntBASIC14□□□□□ -0.17
Trav16d-dv11A0A075B617 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC14□□□□□ -0.17
Trav16d-dv11A0A075B617 Gm20100-201ENSMUST00000209418 2272 ntBASIC14□□□□□ -0.17
Trav16d-dv11A0A075B617 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16d-dv11A0A075B617 Rncr4-201ENSMUST00000194541 2234 ntBASIC14□□□□□ -0.17
Trav16d-dv11A0A075B617 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav16d-dv11A0A075B617 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16d-dv11A0A075B617 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Trav16d-dv11A0A075B617 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16d-dv11A0A075B617 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav16d-dv11A0A075B617 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16d-dv11A0A075B617 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav16d-dv11A0A075B617 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16d-dv11A0A075B617 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16d-dv11A0A075B617 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16d-dv11A0A075B617 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav16d-dv11A0A075B617 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav16d-dv11A0A075B617 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav16d-dv11A0A075B617 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav16d-dv11A0A075B617 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav16d-dv11A0A075B617 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav16d-dv11A0A075B617 Gm7143-201ENSMUST00000222811 859 ntBASIC13.99□□□□□ -0.17
Trav16d-dv11A0A075B617 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav16d-dv11A0A075B617 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.99□□□□□ -0.17
Trav16d-dv11A0A075B617 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav16d-dv11A0A075B617 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav16d-dv11A0A075B617 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav16d-dv11A0A075B617 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav16d-dv11A0A075B617 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav16d-dv11A0A075B617 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav16d-dv11A0A075B617 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav16d-dv11A0A075B617 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav16d-dv11A0A075B617 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16d-dv11A0A075B617 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Gm10420-201ENSMUST00000121713 882 ntBASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16d-dv11A0A075B617 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16d-dv11A0A075B617 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.96□□□□□ -0.17
Trav16d-dv11A0A075B617 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16d-dv11A0A075B617 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav16d-dv11A0A075B617 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16d-dv11A0A075B617 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16d-dv11A0A075B617 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16d-dv11A0A075B617 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16d-dv11A0A075B617 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trav16d-dv11A0A075B617 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms