Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cr1Q9Z0D9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Cx3cr1Q9Z0D9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cr1Q9Z0D9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cr1Q9Z0D9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cx3cr1Q9Z0D9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cr1Q9Z0D9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cr1Q9Z0D9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cr1Q9Z0D9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cr1Q9Z0D9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Cx3cr1Q9Z0D9 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.19■□□□□ 0.18
Cx3cr1Q9Z0D9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cr1Q9Z0D9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cr1Q9Z0D9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cr1Q9Z0D9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cr1Q9Z0D9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cr1Q9Z0D9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.19■□□□□ 0.18
Cx3cr1Q9Z0D9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cr1Q9Z0D9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cr1Q9Z0D9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.18■□□□□ 0.18
Cx3cr1Q9Z0D9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cr1Q9Z0D9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cr1Q9Z0D9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cr1Q9Z0D9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cr1Q9Z0D9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cr1Q9Z0D9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cr1Q9Z0D9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cr1Q9Z0D9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cx3cr1Q9Z0D9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.18■□□□□ 0.18
Cx3cr1Q9Z0D9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cr1Q9Z0D9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cr1Q9Z0D9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cr1Q9Z0D9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cr1Q9Z0D9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cr1Q9Z0D9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cr1Q9Z0D9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.17■□□□□ 0.18
Cx3cr1Q9Z0D9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cr1Q9Z0D9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cx3cr1Q9Z0D9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cr1Q9Z0D9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cr1Q9Z0D9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cr1Q9Z0D9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cx3cr1Q9Z0D9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.17■□□□□ 0.18
Cx3cr1Q9Z0D9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.17■□□□□ 0.18
Cx3cr1Q9Z0D9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cr1Q9Z0D9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.17■□□□□ 0.18
Cx3cr1Q9Z0D9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.17■□□□□ 0.18
Cx3cr1Q9Z0D9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cr1Q9Z0D9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cr1Q9Z0D9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.17■□□□□ 0.18
Cx3cr1Q9Z0D9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cr1Q9Z0D9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cr1Q9Z0D9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cr1Q9Z0D9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cx3cr1Q9Z0D9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cx3cr1Q9Z0D9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cx3cr1Q9Z0D9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cx3cr1Q9Z0D9 Cap2-205ENSMUST00000225824 1634 ntBASIC16.16■□□□□ 0.18
Cx3cr1Q9Z0D9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cx3cr1Q9Z0D9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Cx3cr1Q9Z0D9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cx3cr1Q9Z0D9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Cx3cr1Q9Z0D9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cx3cr1Q9Z0D9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.16■□□□□ 0.18
Cx3cr1Q9Z0D9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Cx3cr1Q9Z0D9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cx3cr1Q9Z0D9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cx3cr1Q9Z0D9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cx3cr1Q9Z0D9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
Cx3cr1Q9Z0D9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.16■□□□□ 0.18
Cx3cr1Q9Z0D9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cx3cr1Q9Z0D9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cx3cr1Q9Z0D9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cx3cr1Q9Z0D9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cx3cr1Q9Z0D9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cx3cr1Q9Z0D9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cx3cr1Q9Z0D9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.15■□□□□ 0.18
Cx3cr1Q9Z0D9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cx3cr1Q9Z0D9 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.15■□□□□ 0.18
Cx3cr1Q9Z0D9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.15■□□□□ 0.18
Cx3cr1Q9Z0D9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cx3cr1Q9Z0D9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Cx3cr1Q9Z0D9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cx3cr1Q9Z0D9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cx3cr1Q9Z0D9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.15■□□□□ 0.18
Cx3cr1Q9Z0D9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cx3cr1Q9Z0D9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.14■□□□□ 0.18
Cx3cr1Q9Z0D9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.14■□□□□ 0.17
Cx3cr1Q9Z0D9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cr1Q9Z0D9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cr1Q9Z0D9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cr1Q9Z0D9 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.14■□□□□ 0.17
Cx3cr1Q9Z0D9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cr1Q9Z0D9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cx3cr1Q9Z0D9 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.14■□□□□ 0.17
Cx3cr1Q9Z0D9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cr1Q9Z0D9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cr1Q9Z0D9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cr1Q9Z0D9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cr1Q9Z0D9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms