Protein–RNA interactions for Protein: Q9WV80

Snx1, Sorting nexin-1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx1Q9WV80 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Snx1Q9WV80 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Snx1Q9WV80 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx1Q9WV80 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx1Q9WV80 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx1Q9WV80 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx1Q9WV80 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx1Q9WV80 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx1Q9WV80 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx1Q9WV80 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx1Q9WV80 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx1Q9WV80 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx1Q9WV80 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.71■□□□□ 0.75
Snx1Q9WV80 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx1Q9WV80 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx1Q9WV80 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
Snx1Q9WV80 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx1Q9WV80 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx1Q9WV80 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Snx1Q9WV80 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.7■□□□□ 0.74
Snx1Q9WV80 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Snx1Q9WV80 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx1Q9WV80 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx1Q9WV80 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx1Q9WV80 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx1Q9WV80 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx1Q9WV80 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Snx1Q9WV80 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx1Q9WV80 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx1Q9WV80 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx1Q9WV80 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Snx1Q9WV80 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx1Q9WV80 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx1Q9WV80 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx1Q9WV80 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Snx1Q9WV80 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.69■□□□□ 0.74
Snx1Q9WV80 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.69■□□□□ 0.74
Snx1Q9WV80 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Snx1Q9WV80 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx1Q9WV80 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx1Q9WV80 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx1Q9WV80 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Snx1Q9WV80 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx1Q9WV80 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.68■□□□□ 0.74
Snx1Q9WV80 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Snx1Q9WV80 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx1Q9WV80 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Snx1Q9WV80 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Snx1Q9WV80 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.68■□□□□ 0.74
Snx1Q9WV80 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.68■□□□□ 0.74
Snx1Q9WV80 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx1Q9WV80 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx1Q9WV80 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.68■□□□□ 0.74
Snx1Q9WV80 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snx1Q9WV80 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Snx1Q9WV80 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snx1Q9WV80 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snx1Q9WV80 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.67■□□□□ 0.74
Snx1Q9WV80 Gm5812-201ENSMUST00000061073 957 ntBASIC19.67■□□□□ 0.74
Snx1Q9WV80 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snx1Q9WV80 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Snx1Q9WV80 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snx1Q9WV80 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snx1Q9WV80 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx1Q9WV80 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx1Q9WV80 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx1Q9WV80 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx1Q9WV80 Rarb-207ENSMUST00000225921 2756 ntBASIC19.66■□□□□ 0.74
Snx1Q9WV80 Gm15546-201ENSMUST00000122095 826 ntBASIC19.66■□□□□ 0.74
Snx1Q9WV80 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Snx1Q9WV80 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.66■□□□□ 0.74
Snx1Q9WV80 Gm22238-201ENSMUST00000175222 88 ntBASIC19.66■□□□□ 0.74
Snx1Q9WV80 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx1Q9WV80 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.66■□□□□ 0.74
Snx1Q9WV80 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Snx1Q9WV80 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx1Q9WV80 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
Snx1Q9WV80 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx1Q9WV80 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx1Q9WV80 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx1Q9WV80 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx1Q9WV80 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.65■□□□□ 0.74
Snx1Q9WV80 Gm9959-201ENSMUST00000068277 390 ntBASIC19.65■□□□□ 0.74
Snx1Q9WV80 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx1Q9WV80 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx1Q9WV80 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Snx1Q9WV80 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx1Q9WV80 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx1Q9WV80 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx1Q9WV80 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx1Q9WV80 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Snx1Q9WV80 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx1Q9WV80 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.65■□□□□ 0.74
Snx1Q9WV80 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Snx1Q9WV80 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Snx1Q9WV80 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Snx1Q9WV80 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Snx1Q9WV80 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Snx1Q9WV80 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Snx1Q9WV80 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms