Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.54■□□□□ 0.4
ClcnkaQ9WUB7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ClcnkaQ9WUB7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClcnkaQ9WUB7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ClcnkaQ9WUB7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClcnkaQ9WUB7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ClcnkaQ9WUB7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClcnkaQ9WUB7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ClcnkaQ9WUB7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ClcnkaQ9WUB7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClcnkaQ9WUB7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ClcnkaQ9WUB7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClcnkaQ9WUB7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClcnkaQ9WUB7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClcnkaQ9WUB7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClcnkaQ9WUB7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.53■□□□□ 0.4
ClcnkaQ9WUB7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClcnkaQ9WUB7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ClcnkaQ9WUB7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClcnkaQ9WUB7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ClcnkaQ9WUB7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClcnkaQ9WUB7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClcnkaQ9WUB7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ClcnkaQ9WUB7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClcnkaQ9WUB7 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.52■□□□□ 0.4
ClcnkaQ9WUB7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.52■□□□□ 0.4
ClcnkaQ9WUB7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ClcnkaQ9WUB7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.52■□□□□ 0.4
ClcnkaQ9WUB7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.52■□□□□ 0.4
ClcnkaQ9WUB7 Gm40848-201ENSMUST00000221998 324 ntBASIC17.52■□□□□ 0.4
ClcnkaQ9WUB7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ClcnkaQ9WUB7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
ClcnkaQ9WUB7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
ClcnkaQ9WUB7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClcnkaQ9WUB7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClcnkaQ9WUB7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClcnkaQ9WUB7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClcnkaQ9WUB7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClcnkaQ9WUB7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
ClcnkaQ9WUB7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.51■□□□□ 0.39
ClcnkaQ9WUB7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClcnkaQ9WUB7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.51■□□□□ 0.39
ClcnkaQ9WUB7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClcnkaQ9WUB7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClcnkaQ9WUB7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClcnkaQ9WUB7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ClcnkaQ9WUB7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ClcnkaQ9WUB7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClcnkaQ9WUB7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ClcnkaQ9WUB7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClcnkaQ9WUB7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ClcnkaQ9WUB7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClcnkaQ9WUB7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.5■□□□□ 0.39
ClcnkaQ9WUB7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClcnkaQ9WUB7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ClcnkaQ9WUB7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClcnkaQ9WUB7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ClcnkaQ9WUB7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClcnkaQ9WUB7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
ClcnkaQ9WUB7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ClcnkaQ9WUB7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClcnkaQ9WUB7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.5■□□□□ 0.39
ClcnkaQ9WUB7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.5■□□□□ 0.39
ClcnkaQ9WUB7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClcnkaQ9WUB7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClcnkaQ9WUB7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClcnkaQ9WUB7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClcnkaQ9WUB7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClcnkaQ9WUB7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ClcnkaQ9WUB7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClcnkaQ9WUB7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.49■□□□□ 0.39
ClcnkaQ9WUB7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ClcnkaQ9WUB7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.49■□□□□ 0.39
ClcnkaQ9WUB7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClcnkaQ9WUB7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
ClcnkaQ9WUB7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClcnkaQ9WUB7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClcnkaQ9WUB7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
ClcnkaQ9WUB7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClcnkaQ9WUB7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClcnkaQ9WUB7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ClcnkaQ9WUB7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ClcnkaQ9WUB7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClcnkaQ9WUB7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClcnkaQ9WUB7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClcnkaQ9WUB7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClcnkaQ9WUB7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClcnkaQ9WUB7 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.48■□□□□ 0.39
ClcnkaQ9WUB7 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.48■□□□□ 0.39
ClcnkaQ9WUB7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClcnkaQ9WUB7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ClcnkaQ9WUB7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClcnkaQ9WUB7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClcnkaQ9WUB7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ClcnkaQ9WUB7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ClcnkaQ9WUB7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ClcnkaQ9WUB7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ClcnkaQ9WUB7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClcnkaQ9WUB7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ClcnkaQ9WUB7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 115 ms