Protein–RNA interactions for Protein: Q9R087

Gpc6, Glypican-6, mousemouse

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gpc6Q9R087 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gpc6Q9R087 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Gpc6Q9R087 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gpc6Q9R087 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gpc6Q9R087 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Gpc6Q9R087 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gpc6Q9R087 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gpc6Q9R087 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.76■□□□□ 0.43
Gpc6Q9R087 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
Gpc6Q9R087 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gpc6Q9R087 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Gpc6Q9R087 Gm9959-201ENSMUST00000068277 390 ntBASIC17.76■□□□□ 0.43
Gpc6Q9R087 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gpc6Q9R087 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gpc6Q9R087 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gpc6Q9R087 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gpc6Q9R087 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Gpc6Q9R087 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gpc6Q9R087 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gpc6Q9R087 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gpc6Q9R087 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Gpc6Q9R087 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gpc6Q9R087 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gpc6Q9R087 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Gpc6Q9R087 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gpc6Q9R087 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gpc6Q9R087 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gpc6Q9R087 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Gpc6Q9R087 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Gpc6Q9R087 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gpc6Q9R087 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gpc6Q9R087 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gpc6Q9R087 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Gpc6Q9R087 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Gpc6Q9R087 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gpc6Q9R087 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gpc6Q9R087 Gm22238-201ENSMUST00000175222 88 ntBASIC17.74■□□□□ 0.43
Gpc6Q9R087 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.74■□□□□ 0.43
Gpc6Q9R087 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gpc6Q9R087 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gpc6Q9R087 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gpc6Q9R087 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gpc6Q9R087 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gpc6Q9R087 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Gpc6Q9R087 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.73■□□□□ 0.43
Gpc6Q9R087 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.73■□□□□ 0.43
Gpc6Q9R087 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gpc6Q9R087 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gpc6Q9R087 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gpc6Q9R087 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gpc6Q9R087 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gpc6Q9R087 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gpc6Q9R087 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gpc6Q9R087 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gpc6Q9R087 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gpc6Q9R087 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gpc6Q9R087 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gpc6Q9R087 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Gpc6Q9R087 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Gpc6Q9R087 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.72■□□□□ 0.43
Gpc6Q9R087 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gpc6Q9R087 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Gpc6Q9R087 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gpc6Q9R087 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gpc6Q9R087 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gpc6Q9R087 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gpc6Q9R087 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Gpc6Q9R087 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gpc6Q9R087 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gpc6Q9R087 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.71■□□□□ 0.43
Gpc6Q9R087 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gpc6Q9R087 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gpc6Q9R087 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gpc6Q9R087 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gpc6Q9R087 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gpc6Q9R087 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.71■□□□□ 0.43
Gpc6Q9R087 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gpc6Q9R087 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gpc6Q9R087 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gpc6Q9R087 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gpc6Q9R087 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.7■□□□□ 0.42
Gpc6Q9R087 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gpc6Q9R087 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.7■□□□□ 0.42
Gpc6Q9R087 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.7■□□□□ 0.42
Gpc6Q9R087 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gpc6Q9R087 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gpc6Q9R087 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gpc6Q9R087 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gpc6Q9R087 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.69■□□□□ 0.42
Gpc6Q9R087 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gpc6Q9R087 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gpc6Q9R087 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gpc6Q9R087 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gpc6Q9R087 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gpc6Q9R087 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.69■□□□□ 0.42
Gpc6Q9R087 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gpc6Q9R087 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.69■□□□□ 0.42
Gpc6Q9R087 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.69■□□□□ 0.42
Gpc6Q9R087 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.69■□□□□ 0.42
Gpc6Q9R087 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms