Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nubp1Q9R060 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nubp1Q9R060 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nubp1Q9R060 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nubp1Q9R060 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nubp1Q9R060 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nubp1Q9R060 Gm13534-201ENSMUST00000121169 513 ntBASIC16.63■□□□□ 0.25
Nubp1Q9R060 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.63■□□□□ 0.25
Nubp1Q9R060 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.63■□□□□ 0.25
Nubp1Q9R060 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nubp1Q9R060 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nubp1Q9R060 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nubp1Q9R060 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nubp1Q9R060 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Nubp1Q9R060 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp1Q9R060 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp1Q9R060 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nubp1Q9R060 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp1Q9R060 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp1Q9R060 Gm6420-201ENSMUST00000193885 723 ntBASIC16.62■□□□□ 0.25
Nubp1Q9R060 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.62■□□□□ 0.25
Nubp1Q9R060 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp1Q9R060 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.62■□□□□ 0.25
Nubp1Q9R060 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nubp1Q9R060 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp1Q9R060 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Nubp1Q9R060 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp1Q9R060 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp1Q9R060 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp1Q9R060 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp1Q9R060 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp1Q9R060 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nubp1Q9R060 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nubp1Q9R060 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nubp1Q9R060 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nubp1Q9R060 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.61■□□□□ 0.25
Nubp1Q9R060 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Nubp1Q9R060 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Nubp1Q9R060 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
Nubp1Q9R060 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nubp1Q9R060 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nubp1Q9R060 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nubp1Q9R060 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nubp1Q9R060 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nubp1Q9R060 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.6■□□□□ 0.25
Nubp1Q9R060 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nubp1Q9R060 Gm26524-201ENSMUST00000192339 390 ntBASIC16.6■□□□□ 0.25
Nubp1Q9R060 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.6■□□□□ 0.25
Nubp1Q9R060 Rab3c-203ENSMUST00000224180 967 ntBASIC16.6■□□□□ 0.25
Nubp1Q9R060 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nubp1Q9R060 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nubp1Q9R060 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Nubp1Q9R060 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.6■□□□□ 0.25
Nubp1Q9R060 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nubp1Q9R060 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
Nubp1Q9R060 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nubp1Q9R060 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nubp1Q9R060 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.59■□□□□ 0.25
Nubp1Q9R060 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nubp1Q9R060 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nubp1Q9R060 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nubp1Q9R060 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nubp1Q9R060 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nubp1Q9R060 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nubp1Q9R060 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nubp1Q9R060 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Nubp1Q9R060 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.59■□□□□ 0.25
Nubp1Q9R060 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nubp1Q9R060 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nubp1Q9R060 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nubp1Q9R060 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nubp1Q9R060 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nubp1Q9R060 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.59■□□□□ 0.25
Nubp1Q9R060 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nubp1Q9R060 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
Nubp1Q9R060 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nubp1Q9R060 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nubp1Q9R060 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.58■□□□□ 0.25
Nubp1Q9R060 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nubp1Q9R060 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nubp1Q9R060 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
Nubp1Q9R060 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Nubp1Q9R060 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.58■□□□□ 0.24
Nubp1Q9R060 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.58■□□□□ 0.24
Nubp1Q9R060 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nubp1Q9R060 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nubp1Q9R060 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nubp1Q9R060 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nubp1Q9R060 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nubp1Q9R060 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nubp1Q9R060 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
Nubp1Q9R060 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nubp1Q9R060 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Nubp1Q9R060 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nubp1Q9R060 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nubp1Q9R060 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nubp1Q9R060 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nubp1Q9R060 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nubp1Q9R060 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nubp1Q9R060 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms