Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4bQ9ES00 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4bQ9ES00 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4bQ9ES00 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.35■□□□□ 0.53
Ube4bQ9ES00 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ube4bQ9ES00 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ube4bQ9ES00 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4bQ9ES00 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4bQ9ES00 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4bQ9ES00 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4bQ9ES00 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ube4bQ9ES00 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4bQ9ES00 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube4bQ9ES00 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube4bQ9ES00 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube4bQ9ES00 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ube4bQ9ES00 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ube4bQ9ES00 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ube4bQ9ES00 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.34■□□□□ 0.53
Ube4bQ9ES00 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.34■□□□□ 0.53
Ube4bQ9ES00 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube4bQ9ES00 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ube4bQ9ES00 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube4bQ9ES00 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ube4bQ9ES00 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ube4bQ9ES00 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ube4bQ9ES00 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ube4bQ9ES00 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Ube4bQ9ES00 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ube4bQ9ES00 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.33■□□□□ 0.52
Ube4bQ9ES00 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ube4bQ9ES00 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ube4bQ9ES00 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ube4bQ9ES00 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.33■□□□□ 0.52
Ube4bQ9ES00 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ube4bQ9ES00 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4bQ9ES00 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4bQ9ES00 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ube4bQ9ES00 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.32■□□□□ 0.52
Ube4bQ9ES00 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4bQ9ES00 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ube4bQ9ES00 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.32■□□□□ 0.52
Ube4bQ9ES00 Gm43566-201ENSMUST00000196851 808 ntBASIC18.32■□□□□ 0.52
Ube4bQ9ES00 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4bQ9ES00 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4bQ9ES00 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4bQ9ES00 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4bQ9ES00 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4bQ9ES00 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4bQ9ES00 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ube4bQ9ES00 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4bQ9ES00 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4bQ9ES00 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.31■□□□□ 0.52
Ube4bQ9ES00 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4bQ9ES00 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ube4bQ9ES00 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4bQ9ES00 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4bQ9ES00 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.31■□□□□ 0.52
Ube4bQ9ES00 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4bQ9ES00 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4bQ9ES00 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.31■□□□□ 0.52
Ube4bQ9ES00 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ube4bQ9ES00 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4bQ9ES00 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4bQ9ES00 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ube4bQ9ES00 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4bQ9ES00 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ube4bQ9ES00 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ube4bQ9ES00 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4bQ9ES00 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4bQ9ES00 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4bQ9ES00 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4bQ9ES00 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4bQ9ES00 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4bQ9ES00 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.3■□□□□ 0.52
Ube4bQ9ES00 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
Ube4bQ9ES00 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4bQ9ES00 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4bQ9ES00 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4bQ9ES00 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.3■□□□□ 0.52
Ube4bQ9ES00 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4bQ9ES00 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.3■□□□□ 0.52
Ube4bQ9ES00 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4bQ9ES00 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ube4bQ9ES00 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4bQ9ES00 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ube4bQ9ES00 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.3■□□□□ 0.52
Ube4bQ9ES00 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.3■□□□□ 0.52
Ube4bQ9ES00 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.3■□□□□ 0.52
Ube4bQ9ES00 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.29■□□□□ 0.52
Ube4bQ9ES00 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube4bQ9ES00 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube4bQ9ES00 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube4bQ9ES00 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube4bQ9ES00 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube4bQ9ES00 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube4bQ9ES00 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube4bQ9ES00 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube4bQ9ES00 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube4bQ9ES00 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms