Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.48■□□□□ 0.39
Hmg20aQ9DC33 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmg20aQ9DC33 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmg20aQ9DC33 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmg20aQ9DC33 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Hmg20aQ9DC33 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmg20aQ9DC33 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmg20aQ9DC33 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hmg20aQ9DC33 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmg20aQ9DC33 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmg20aQ9DC33 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmg20aQ9DC33 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hmg20aQ9DC33 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmg20aQ9DC33 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hmg20aQ9DC33 Gm10420-201ENSMUST00000121713 882 ntBASIC17.47■□□□□ 0.39
Hmg20aQ9DC33 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmg20aQ9DC33 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmg20aQ9DC33 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hmg20aQ9DC33 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmg20aQ9DC33 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmg20aQ9DC33 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmg20aQ9DC33 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmg20aQ9DC33 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hmg20aQ9DC33 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmg20aQ9DC33 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmg20aQ9DC33 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmg20aQ9DC33 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmg20aQ9DC33 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmg20aQ9DC33 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Hmg20aQ9DC33 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmg20aQ9DC33 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmg20aQ9DC33 Mir6538-201ENSMUST00000183713 110 ntBASIC17.46■□□□□ 0.39
Hmg20aQ9DC33 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.46■□□□□ 0.39
Hmg20aQ9DC33 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.46■□□□□ 0.39
Hmg20aQ9DC33 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hmg20aQ9DC33 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Hmg20aQ9DC33 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmg20aQ9DC33 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmg20aQ9DC33 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmg20aQ9DC33 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmg20aQ9DC33 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmg20aQ9DC33 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmg20aQ9DC33 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmg20aQ9DC33 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmg20aQ9DC33 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hmg20aQ9DC33 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Hmg20aQ9DC33 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmg20aQ9DC33 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Hmg20aQ9DC33 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.45■□□□□ 0.38
Hmg20aQ9DC33 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmg20aQ9DC33 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Hmg20aQ9DC33 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.45■□□□□ 0.38
Hmg20aQ9DC33 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmg20aQ9DC33 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.45■□□□□ 0.38
Hmg20aQ9DC33 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Hmg20aQ9DC33 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmg20aQ9DC33 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmg20aQ9DC33 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20aQ9DC33 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Hmg20aQ9DC33 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Hmg20aQ9DC33 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Hmg20aQ9DC33 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20aQ9DC33 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20aQ9DC33 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.44■□□□□ 0.38
Hmg20aQ9DC33 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20aQ9DC33 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Hmg20aQ9DC33 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20aQ9DC33 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20aQ9DC33 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20aQ9DC33 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Hmg20aQ9DC33 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20aQ9DC33 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.43■□□□□ 0.38
Hmg20aQ9DC33 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hmg20aQ9DC33 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20aQ9DC33 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20aQ9DC33 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.43■□□□□ 0.38
Hmg20aQ9DC33 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.43■□□□□ 0.38
Hmg20aQ9DC33 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20aQ9DC33 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20aQ9DC33 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20aQ9DC33 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20aQ9DC33 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20aQ9DC33 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.43■□□□□ 0.38
Hmg20aQ9DC33 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20aQ9DC33 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20aQ9DC33 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hmg20aQ9DC33 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20aQ9DC33 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Hmg20aQ9DC33 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20aQ9DC33 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Hmg20aQ9DC33 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20aQ9DC33 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20aQ9DC33 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Hmg20aQ9DC33 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Hmg20aQ9DC33 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20aQ9DC33 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20aQ9DC33 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20aQ9DC33 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20aQ9DC33 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20aQ9DC33 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms