Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssr1Q9CY50 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssr1Q9CY50 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssr1Q9CY50 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssr1Q9CY50 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssr1Q9CY50 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ssr1Q9CY50 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssr1Q9CY50 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssr1Q9CY50 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssr1Q9CY50 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssr1Q9CY50 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssr1Q9CY50 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssr1Q9CY50 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssr1Q9CY50 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.61■□□□□ 0.89
Ssr1Q9CY50 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ssr1Q9CY50 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ssr1Q9CY50 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Ssr1Q9CY50 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ssr1Q9CY50 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.61■□□□□ 0.89
Ssr1Q9CY50 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ssr1Q9CY50 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ssr1Q9CY50 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ssr1Q9CY50 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ssr1Q9CY50 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ssr1Q9CY50 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ssr1Q9CY50 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ssr1Q9CY50 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ssr1Q9CY50 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ssr1Q9CY50 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ssr1Q9CY50 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ssr1Q9CY50 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ssr1Q9CY50 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.6■□□□□ 0.89
Ssr1Q9CY50 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ssr1Q9CY50 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.6■□□□□ 0.89
Ssr1Q9CY50 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ssr1Q9CY50 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.6■□□□□ 0.89
Ssr1Q9CY50 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ssr1Q9CY50 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Ssr1Q9CY50 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ssr1Q9CY50 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ssr1Q9CY50 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ssr1Q9CY50 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ssr1Q9CY50 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ssr1Q9CY50 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ssr1Q9CY50 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ssr1Q9CY50 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Ssr1Q9CY50 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ssr1Q9CY50 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.58■□□□□ 0.89
Ssr1Q9CY50 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ssr1Q9CY50 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ssr1Q9CY50 Gm12922-201ENSMUST00000120626 809 ntBASIC20.58■□□□□ 0.89
Ssr1Q9CY50 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ssr1Q9CY50 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.89
Ssr1Q9CY50 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ssr1Q9CY50 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
Ssr1Q9CY50 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ssr1Q9CY50 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ssr1Q9CY50 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ssr1Q9CY50 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ssr1Q9CY50 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ssr1Q9CY50 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ssr1Q9CY50 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ssr1Q9CY50 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ssr1Q9CY50 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ssr1Q9CY50 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ssr1Q9CY50 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ssr1Q9CY50 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ssr1Q9CY50 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ssr1Q9CY50 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ssr1Q9CY50 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.56■□□□□ 0.88
Ssr1Q9CY50 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ssr1Q9CY50 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ssr1Q9CY50 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ssr1Q9CY50 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ssr1Q9CY50 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.56■□□□□ 0.88
Ssr1Q9CY50 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.56■□□□□ 0.88
Ssr1Q9CY50 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ssr1Q9CY50 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ssr1Q9CY50 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ssr1Q9CY50 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ssr1Q9CY50 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ssr1Q9CY50 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.56■□□□□ 0.88
Ssr1Q9CY50 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ssr1Q9CY50 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.55■□□□□ 0.88
Ssr1Q9CY50 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ssr1Q9CY50 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ssr1Q9CY50 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ssr1Q9CY50 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ssr1Q9CY50 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ssr1Q9CY50 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ssr1Q9CY50 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ssr1Q9CY50 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ssr1Q9CY50 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ssr1Q9CY50 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ssr1Q9CY50 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ssr1Q9CY50 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ssr1Q9CY50 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
Ssr1Q9CY50 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ssr1Q9CY50 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Ssr1Q9CY50 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms