Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Cldnd1Q9CQX5 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.71■□□□□ 0.75
Cldnd1Q9CQX5 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cldnd1Q9CQX5 Gm10698-201ENSMUST00000182663 604 ntBASIC19.71■□□□□ 0.75
Cldnd1Q9CQX5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldnd1Q9CQX5 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.71■□□□□ 0.75
Cldnd1Q9CQX5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cldnd1Q9CQX5 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Cldnd1Q9CQX5 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cldnd1Q9CQX5 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cldnd1Q9CQX5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldnd1Q9CQX5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cldnd1Q9CQX5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldnd1Q9CQX5 Gm11249-201ENSMUST00000117071 859 ntBASIC19.7■□□□□ 0.74
Cldnd1Q9CQX5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.7■□□□□ 0.74
Cldnd1Q9CQX5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldnd1Q9CQX5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.7■□□□□ 0.74
Cldnd1Q9CQX5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cldnd1Q9CQX5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Cldnd1Q9CQX5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cldnd1Q9CQX5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldnd1Q9CQX5 Gm11643-201ENSMUST00000119578 864 ntBASIC19.69■□□□□ 0.74
Cldnd1Q9CQX5 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldnd1Q9CQX5 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cldnd1Q9CQX5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cldnd1Q9CQX5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.69■□□□□ 0.74
Cldnd1Q9CQX5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cldnd1Q9CQX5 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.68■□□□□ 0.74
Cldnd1Q9CQX5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.68■□□□□ 0.74
Cldnd1Q9CQX5 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.68■□□□□ 0.74
Cldnd1Q9CQX5 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cldnd1Q9CQX5 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Cldnd1Q9CQX5 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.68■□□□□ 0.74
Cldnd1Q9CQX5 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldnd1Q9CQX5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldnd1Q9CQX5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
Cldnd1Q9CQX5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldnd1Q9CQX5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cldnd1Q9CQX5 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldnd1Q9CQX5 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.67■□□□□ 0.74
Cldnd1Q9CQX5 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldnd1Q9CQX5 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.67■□□□□ 0.74
Cldnd1Q9CQX5 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Cldnd1Q9CQX5 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldnd1Q9CQX5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cldnd1Q9CQX5 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldnd1Q9CQX5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cldnd1Q9CQX5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.67■□□□□ 0.74
Cldnd1Q9CQX5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldnd1Q9CQX5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cldnd1Q9CQX5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
Cldnd1Q9CQX5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldnd1Q9CQX5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldnd1Q9CQX5 Gm15378-201ENSMUST00000121894 207 ntBASIC19.66■□□□□ 0.74
Cldnd1Q9CQX5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.66■□□□□ 0.74
Cldnd1Q9CQX5 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.66■□□□□ 0.74
Cldnd1Q9CQX5 Gm44549-201ENSMUST00000208351 577 ntBASIC19.66■□□□□ 0.74
Cldnd1Q9CQX5 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.66■□□□□ 0.74
Cldnd1Q9CQX5 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cldnd1Q9CQX5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldnd1Q9CQX5 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldnd1Q9CQX5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldnd1Q9CQX5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldnd1Q9CQX5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cldnd1Q9CQX5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.65■□□□□ 0.74
Cldnd1Q9CQX5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldnd1Q9CQX5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldnd1Q9CQX5 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Cldnd1Q9CQX5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cldnd1Q9CQX5 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldnd1Q9CQX5 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.65■□□□□ 0.74
Cldnd1Q9CQX5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cldnd1Q9CQX5 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldnd1Q9CQX5 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cldnd1Q9CQX5 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldnd1Q9CQX5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cldnd1Q9CQX5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldnd1Q9CQX5 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.64■□□□□ 0.74
Cldnd1Q9CQX5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cldnd1Q9CQX5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Cldnd1Q9CQX5 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.64■□□□□ 0.73
Cldnd1Q9CQX5 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Cldnd1Q9CQX5 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.64■□□□□ 0.73
Cldnd1Q9CQX5 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Cldnd1Q9CQX5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Cldnd1Q9CQX5 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.64■□□□□ 0.73
Cldnd1Q9CQX5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cldnd1Q9CQX5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Cldnd1Q9CQX5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldnd1Q9CQX5 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldnd1Q9CQX5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldnd1Q9CQX5 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cldnd1Q9CQX5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Cldnd1Q9CQX5 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldnd1Q9CQX5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.64■□□□□ 0.73
Cldnd1Q9CQX5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Cldnd1Q9CQX5 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldnd1Q9CQX5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cldnd1Q9CQX5 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldnd1Q9CQX5 Gm2399-201ENSMUST00000104944 225 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms