Protein–RNA interactions for Protein: Q9CQC3

Protein C9orf135 homolog, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQC3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.92■□□□□ 0.78
Q9CQC3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Q9CQC3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Q9CQC3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Q9CQC3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q9CQC3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Q9CQC3 Gm7860-201ENSMUST00000121190 879 ntBASIC19.91■□□□□ 0.78
Q9CQC3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q9CQC3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q9CQC3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Q9CQC3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q9CQC3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q9CQC3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Q9CQC3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q9CQC3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q9CQC3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q9CQC3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q9CQC3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Q9CQC3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.9■□□□□ 0.78
Q9CQC3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.9■□□□□ 0.78
Q9CQC3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Q9CQC3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Q9CQC3 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.9■□□□□ 0.78
Q9CQC3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.89■□□□□ 0.78
Q9CQC3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Q9CQC3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q9CQC3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Q9CQC3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Q9CQC3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Q9CQC3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q9CQC3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Q9CQC3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Q9CQC3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q9CQC3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.88■□□□□ 0.77
Q9CQC3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.88■□□□□ 0.77
Q9CQC3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.88■□□□□ 0.77
Q9CQC3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Q9CQC3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q9CQC3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q9CQC3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q9CQC3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q9CQC3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q9CQC3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q9CQC3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q9CQC3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q9CQC3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.87■□□□□ 0.77
Q9CQC3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q9CQC3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Q9CQC3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.87■□□□□ 0.77
Q9CQC3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Q9CQC3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.87■□□□□ 0.77
Q9CQC3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q9CQC3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Q9CQC3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q9CQC3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.86■□□□□ 0.77
Q9CQC3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q9CQC3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Q9CQC3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q9CQC3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q9CQC3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q9CQC3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Q9CQC3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q9CQC3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q9CQC3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Q9CQC3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Q9CQC3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Q9CQC3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Q9CQC3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.85■□□□□ 0.77
Q9CQC3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q9CQC3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Q9CQC3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.85■□□□□ 0.77
Q9CQC3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Q9CQC3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Q9CQC3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q9CQC3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Q9CQC3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q9CQC3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.85■□□□□ 0.77
Q9CQC3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.85■□□□□ 0.77
Q9CQC3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q9CQC3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Q9CQC3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q9CQC3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q9CQC3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q9CQC3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q9CQC3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q9CQC3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Q9CQC3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Q9CQC3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Q9CQC3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q9CQC3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Q9CQC3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Q9CQC3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q9CQC3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.84■□□□□ 0.77
Q9CQC3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.84■□□□□ 0.77
Q9CQC3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Q9CQC3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q9CQC3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q9CQC3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q9CQC3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q9CQC3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms