Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TpbpbQ9CQC0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TpbpbQ9CQC0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TpbpbQ9CQC0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TpbpbQ9CQC0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TpbpbQ9CQC0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TpbpbQ9CQC0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TpbpbQ9CQC0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.06■□□□□ 0.32
TpbpbQ9CQC0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TpbpbQ9CQC0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TpbpbQ9CQC0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TpbpbQ9CQC0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TpbpbQ9CQC0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TpbpbQ9CQC0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TpbpbQ9CQC0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.05■□□□□ 0.32
TpbpbQ9CQC0 Etf1-202ENSMUST00000180351 108 ntBASIC17.05■□□□□ 0.32
TpbpbQ9CQC0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.05■□□□□ 0.32
TpbpbQ9CQC0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.05■□□□□ 0.32
TpbpbQ9CQC0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TpbpbQ9CQC0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TpbpbQ9CQC0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TpbpbQ9CQC0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TpbpbQ9CQC0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.05■□□□□ 0.32
TpbpbQ9CQC0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
TpbpbQ9CQC0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TpbpbQ9CQC0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TpbpbQ9CQC0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TpbpbQ9CQC0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TpbpbQ9CQC0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.04■□□□□ 0.32
TpbpbQ9CQC0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.04■□□□□ 0.32
TpbpbQ9CQC0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TpbpbQ9CQC0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TpbpbQ9CQC0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TpbpbQ9CQC0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TpbpbQ9CQC0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
TpbpbQ9CQC0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TpbpbQ9CQC0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
TpbpbQ9CQC0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
TpbpbQ9CQC0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TpbpbQ9CQC0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TpbpbQ9CQC0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TpbpbQ9CQC0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TpbpbQ9CQC0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TpbpbQ9CQC0 AA386476-201ENSMUST00000098781 1665 ntBASIC17.04■□□□□ 0.32
TpbpbQ9CQC0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TpbpbQ9CQC0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TpbpbQ9CQC0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TpbpbQ9CQC0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TpbpbQ9CQC0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.03■□□□□ 0.32
TpbpbQ9CQC0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TpbpbQ9CQC0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.03■□□□□ 0.32
TpbpbQ9CQC0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TpbpbQ9CQC0 Gm9870-201ENSMUST00000063874 645 ntBASIC17.03■□□□□ 0.32
TpbpbQ9CQC0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TpbpbQ9CQC0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TpbpbQ9CQC0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TpbpbQ9CQC0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TpbpbQ9CQC0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TpbpbQ9CQC0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TpbpbQ9CQC0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TpbpbQ9CQC0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TpbpbQ9CQC0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TpbpbQ9CQC0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TpbpbQ9CQC0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TpbpbQ9CQC0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TpbpbQ9CQC0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TpbpbQ9CQC0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TpbpbQ9CQC0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TpbpbQ9CQC0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.01■□□□□ 0.31
TpbpbQ9CQC0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TpbpbQ9CQC0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TpbpbQ9CQC0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TpbpbQ9CQC0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TpbpbQ9CQC0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TpbpbQ9CQC0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TpbpbQ9CQC0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TpbpbQ9CQC0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TpbpbQ9CQC0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TpbpbQ9CQC0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TpbpbQ9CQC0 Gm20100-201ENSMUST00000209418 2272 ntBASIC17■□□□□ 0.31
TpbpbQ9CQC0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TpbpbQ9CQC0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TpbpbQ9CQC0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TpbpbQ9CQC0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TpbpbQ9CQC0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TpbpbQ9CQC0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17■□□□□ 0.31
TpbpbQ9CQC0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17■□□□□ 0.31
TpbpbQ9CQC0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TpbpbQ9CQC0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17■□□□□ 0.31
TpbpbQ9CQC0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TpbpbQ9CQC0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TpbpbQ9CQC0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TpbpbQ9CQC0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TpbpbQ9CQC0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TpbpbQ9CQC0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.99■□□□□ 0.31
TpbpbQ9CQC0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TpbpbQ9CQC0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TpbpbQ9CQC0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TpbpbQ9CQC0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TpbpbQ9CQC0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms