Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Msh4Q99MT2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Msh4Q99MT2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.57■□□□□ 0.56
Msh4Q99MT2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.57■□□□□ 0.56
Msh4Q99MT2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msh4Q99MT2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msh4Q99MT2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msh4Q99MT2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Msh4Q99MT2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Msh4Q99MT2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh4Q99MT2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Msh4Q99MT2 Gm11421-201ENSMUST00000122124 294 ntBASIC18.56■□□□□ 0.56
Msh4Q99MT2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Msh4Q99MT2 Gm18284-201ENSMUST00000172604 624 ntBASIC18.56■□□□□ 0.56
Msh4Q99MT2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Msh4Q99MT2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Msh4Q99MT2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh4Q99MT2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh4Q99MT2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Msh4Q99MT2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Msh4Q99MT2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh4Q99MT2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Msh4Q99MT2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh4Q99MT2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Msh4Q99MT2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Msh4Q99MT2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh4Q99MT2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh4Q99MT2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Msh4Q99MT2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.55■□□□□ 0.56
Msh4Q99MT2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Msh4Q99MT2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Msh4Q99MT2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh4Q99MT2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.55■□□□□ 0.56
Msh4Q99MT2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh4Q99MT2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Msh4Q99MT2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh4Q99MT2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh4Q99MT2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh4Q99MT2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh4Q99MT2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.55■□□□□ 0.56
Msh4Q99MT2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh4Q99MT2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh4Q99MT2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh4Q99MT2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Msh4Q99MT2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.54■□□□□ 0.56
Msh4Q99MT2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Msh4Q99MT2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh4Q99MT2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Msh4Q99MT2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh4Q99MT2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh4Q99MT2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh4Q99MT2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh4Q99MT2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.54■□□□□ 0.56
Msh4Q99MT2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.54■□□□□ 0.56
Msh4Q99MT2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh4Q99MT2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh4Q99MT2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh4Q99MT2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh4Q99MT2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Msh4Q99MT2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.53■□□□□ 0.56
Msh4Q99MT2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Msh4Q99MT2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh4Q99MT2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.53■□□□□ 0.56
Msh4Q99MT2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.53■□□□□ 0.56
Msh4Q99MT2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh4Q99MT2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh4Q99MT2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh4Q99MT2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Msh4Q99MT2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh4Q99MT2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.52■□□□□ 0.56
Msh4Q99MT2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh4Q99MT2 Gm8495-201ENSMUST00000188740 694 ntBASIC18.52■□□□□ 0.56
Msh4Q99MT2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh4Q99MT2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Msh4Q99MT2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh4Q99MT2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh4Q99MT2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Msh4Q99MT2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Msh4Q99MT2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Msh4Q99MT2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Msh4Q99MT2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.51■□□□□ 0.55
Msh4Q99MT2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.51■□□□□ 0.55
Msh4Q99MT2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.51■□□□□ 0.55
Msh4Q99MT2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Msh4Q99MT2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.51■□□□□ 0.55
Msh4Q99MT2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Msh4Q99MT2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Msh4Q99MT2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.51■□□□□ 0.55
Msh4Q99MT2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh4Q99MT2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh4Q99MT2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh4Q99MT2 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.5■□□□□ 0.55
Msh4Q99MT2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh4Q99MT2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh4Q99MT2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh4Q99MT2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh4Q99MT2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Msh4Q99MT2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Msh4Q99MT2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh4Q99MT2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms