Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Pcdhb1Q91Y08 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.89■□□□□ 0.77
Pcdhb1Q91Y08 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb1Q91Y08 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb1Q91Y08 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Pcdhb1Q91Y08 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb1Q91Y08 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb1Q91Y08 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb1Q91Y08 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.88■□□□□ 0.77
Pcdhb1Q91Y08 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb1Q91Y08 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb1Q91Y08 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb1Q91Y08 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Pcdhb1Q91Y08 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Pcdhb1Q91Y08 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb1Q91Y08 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb1Q91Y08 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.88■□□□□ 0.77
Pcdhb1Q91Y08 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb1Q91Y08 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Pcdhb1Q91Y08 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.88■□□□□ 0.77
Pcdhb1Q91Y08 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb1Q91Y08 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb1Q91Y08 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb1Q91Y08 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb1Q91Y08 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb1Q91Y08 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Pcdhb1Q91Y08 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Pcdhb1Q91Y08 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Pcdhb1Q91Y08 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Pcdhb1Q91Y08 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb1Q91Y08 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb1Q91Y08 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb1Q91Y08 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb1Q91Y08 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb1Q91Y08 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb1Q91Y08 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb1Q91Y08 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb1Q91Y08 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb1Q91Y08 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Pcdhb1Q91Y08 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.87■□□□□ 0.77
Pcdhb1Q91Y08 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb1Q91Y08 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb1Q91Y08 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb1Q91Y08 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb1Q91Y08 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.87■□□□□ 0.77
Pcdhb1Q91Y08 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb1Q91Y08 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb1Q91Y08 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb1Q91Y08 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.86■□□□□ 0.77
Pcdhb1Q91Y08 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Pcdhb1Q91Y08 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.86■□□□□ 0.77
Pcdhb1Q91Y08 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb1Q91Y08 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb1Q91Y08 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb1Q91Y08 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhb1Q91Y08 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb1Q91Y08 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb1Q91Y08 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb1Q91Y08 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhb1Q91Y08 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb1Q91Y08 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhb1Q91Y08 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb1Q91Y08 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb1Q91Y08 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Pcdhb1Q91Y08 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb1Q91Y08 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.85■□□□□ 0.77
Pcdhb1Q91Y08 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb1Q91Y08 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb1Q91Y08 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Pcdhb1Q91Y08 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb1Q91Y08 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb1Q91Y08 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb1Q91Y08 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb1Q91Y08 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdhb1Q91Y08 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb1Q91Y08 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb1Q91Y08 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.84■□□□□ 0.77
Pcdhb1Q91Y08 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.84■□□□□ 0.77
Pcdhb1Q91Y08 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhb1Q91Y08 Gm43060-201ENSMUST00000200621 289 ntBASIC19.84■□□□□ 0.77
Pcdhb1Q91Y08 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdhb1Q91Y08 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhb1Q91Y08 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb1Q91Y08 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.83■□□□□ 0.77
Pcdhb1Q91Y08 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb1Q91Y08 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb1Q91Y08 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.83■□□□□ 0.77
Pcdhb1Q91Y08 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb1Q91Y08 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb1Q91Y08 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.83■□□□□ 0.76
Pcdhb1Q91Y08 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb1Q91Y08 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb1Q91Y08 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb1Q91Y08 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb1Q91Y08 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb1Q91Y08 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb1Q91Y08 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb1Q91Y08 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb1Q91Y08 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Pcdhb1Q91Y08 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms