Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb3Q91XZ7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.03■□□□□ 0.64
Pcdhb3Q91XZ7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
Pcdhb3Q91XZ7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.03■□□□□ 0.64
Pcdhb3Q91XZ7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb3Q91XZ7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb3Q91XZ7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb3Q91XZ7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb3Q91XZ7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Pcdhb3Q91XZ7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb3Q91XZ7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb3Q91XZ7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb3Q91XZ7 Fst-202ENSMUST00000223640 2612 ntBASIC19.02■□□□□ 0.64
Pcdhb3Q91XZ7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.02■□□□□ 0.64
Pcdhb3Q91XZ7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb3Q91XZ7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhb3Q91XZ7 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.02■□□□□ 0.63
Pcdhb3Q91XZ7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhb3Q91XZ7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb3Q91XZ7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb3Q91XZ7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb3Q91XZ7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pcdhb3Q91XZ7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Pcdhb3Q91XZ7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb3Q91XZ7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdhb3Q91XZ7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.01■□□□□ 0.63
Pcdhb3Q91XZ7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.01■□□□□ 0.63
Pcdhb3Q91XZ7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb3Q91XZ7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb3Q91XZ7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb3Q91XZ7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Pcdhb3Q91XZ7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Pcdhb3Q91XZ7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb3Q91XZ7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb3Q91XZ7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19■□□□□ 0.63
Pcdhb3Q91XZ7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb3Q91XZ7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb3Q91XZ7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb3Q91XZ7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb3Q91XZ7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb3Q91XZ7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb3Q91XZ7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhb3Q91XZ7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb3Q91XZ7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb3Q91XZ7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhb3Q91XZ7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Pcdhb3Q91XZ7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb3Q91XZ7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb3Q91XZ7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.99■□□□□ 0.63
Pcdhb3Q91XZ7 Gm21956-201ENSMUST00000179946 522 ntBASIC18.99■□□□□ 0.63
Pcdhb3Q91XZ7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pcdhb3Q91XZ7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb3Q91XZ7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb3Q91XZ7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb3Q91XZ7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb3Q91XZ7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb3Q91XZ7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.99■□□□□ 0.63
Pcdhb3Q91XZ7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb3Q91XZ7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb3Q91XZ7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb3Q91XZ7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Pcdhb3Q91XZ7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Pcdhb3Q91XZ7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Pcdhb3Q91XZ7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Pcdhb3Q91XZ7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb3Q91XZ7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb3Q91XZ7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb3Q91XZ7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb3Q91XZ7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb3Q91XZ7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb3Q91XZ7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb3Q91XZ7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.98■□□□□ 0.63
Pcdhb3Q91XZ7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb3Q91XZ7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb3Q91XZ7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb3Q91XZ7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Pcdhb3Q91XZ7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Pcdhb3Q91XZ7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb3Q91XZ7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb3Q91XZ7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Pcdhb3Q91XZ7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb3Q91XZ7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb3Q91XZ7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb3Q91XZ7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb3Q91XZ7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb3Q91XZ7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.96■□□□□ 0.63
Pcdhb3Q91XZ7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb3Q91XZ7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb3Q91XZ7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.96■□□□□ 0.63
Pcdhb3Q91XZ7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhb3Q91XZ7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb3Q91XZ7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb3Q91XZ7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb3Q91XZ7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb3Q91XZ7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb3Q91XZ7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb3Q91XZ7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb3Q91XZ7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb3Q91XZ7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb3Q91XZ7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms