Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc3Q91XX1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc3Q91XX1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc3Q91XX1 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.04■□□□□ 0.48
Pcdhgc3Q91XX1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc3Q91XX1 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.04■□□□□ 0.48
Pcdhgc3Q91XX1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc3Q91XX1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc3Q91XX1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc3Q91XX1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc3Q91XX1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc3Q91XX1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc3Q91XX1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc3Q91XX1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc3Q91XX1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc3Q91XX1 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.03■□□□□ 0.48
Pcdhgc3Q91XX1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.03■□□□□ 0.48
Pcdhgc3Q91XX1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pcdhgc3Q91XX1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc3Q91XX1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc3Q91XX1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc3Q91XX1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc3Q91XX1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhgc3Q91XX1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgc3Q91XX1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgc3Q91XX1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.02■□□□□ 0.48
Pcdhgc3Q91XX1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgc3Q91XX1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhgc3Q91XX1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgc3Q91XX1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgc3Q91XX1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhgc3Q91XX1 AA386476-201ENSMUST00000098781 1665 ntBASIC18.02■□□□□ 0.47
Pcdhgc3Q91XX1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhgc3Q91XX1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhgc3Q91XX1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgc3Q91XX1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgc3Q91XX1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgc3Q91XX1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgc3Q91XX1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgc3Q91XX1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgc3Q91XX1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgc3Q91XX1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgc3Q91XX1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgc3Q91XX1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.01■□□□□ 0.47
Pcdhgc3Q91XX1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhgc3Q91XX1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgc3Q91XX1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhgc3Q91XX1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgc3Q91XX1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgc3Q91XX1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgc3Q91XX1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgc3Q91XX1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgc3Q91XX1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgc3Q91XX1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgc3Q91XX1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgc3Q91XX1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18■□□□□ 0.47
Pcdhgc3Q91XX1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgc3Q91XX1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgc3Q91XX1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Pcdhgc3Q91XX1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgc3Q91XX1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgc3Q91XX1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgc3Q91XX1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgc3Q91XX1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgc3Q91XX1 Gm19439-201ENSMUST00000198195 2273 ntBASIC18■□□□□ 0.47
Pcdhgc3Q91XX1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgc3Q91XX1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgc3Q91XX1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgc3Q91XX1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgc3Q91XX1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgc3Q91XX1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgc3Q91XX1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.99■□□□□ 0.47
Pcdhgc3Q91XX1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgc3Q91XX1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgc3Q91XX1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgc3Q91XX1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgc3Q91XX1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgc3Q91XX1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhgc3Q91XX1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgc3Q91XX1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgc3Q91XX1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgc3Q91XX1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgc3Q91XX1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhgc3Q91XX1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgc3Q91XX1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgc3Q91XX1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgc3Q91XX1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.47
Pcdhgc3Q91XX1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pcdhgc3Q91XX1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhgc3Q91XX1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgc3Q91XX1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgc3Q91XX1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgc3Q91XX1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdhgc3Q91XX1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgc3Q91XX1 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.97■□□□□ 0.47
Pcdhgc3Q91XX1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgc3Q91XX1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgc3Q91XX1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.97■□□□□ 0.47
Pcdhgc3Q91XX1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdhgc3Q91XX1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms