Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lims2Q91XD2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lims2Q91XD2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lims2Q91XD2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lims2Q91XD2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lims2Q91XD2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lims2Q91XD2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lims2Q91XD2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lims2Q91XD2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lims2Q91XD2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lims2Q91XD2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lims2Q91XD2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lims2Q91XD2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Lims2Q91XD2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lims2Q91XD2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Lims2Q91XD2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lims2Q91XD2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lims2Q91XD2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lims2Q91XD2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lims2Q91XD2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lims2Q91XD2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Lims2Q91XD2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lims2Q91XD2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Lims2Q91XD2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lims2Q91XD2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lims2Q91XD2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lims2Q91XD2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lims2Q91XD2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.65■□□□□ 0.74
Lims2Q91XD2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Lims2Q91XD2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lims2Q91XD2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lims2Q91XD2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lims2Q91XD2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lims2Q91XD2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lims2Q91XD2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lims2Q91XD2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.64■□□□□ 0.73
Lims2Q91XD2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lims2Q91XD2 Gm6420-201ENSMUST00000193885 723 ntBASIC19.64■□□□□ 0.73
Lims2Q91XD2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.64■□□□□ 0.73
Lims2Q91XD2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lims2Q91XD2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lims2Q91XD2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lims2Q91XD2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
Lims2Q91XD2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.64■□□□□ 0.73
Lims2Q91XD2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lims2Q91XD2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lims2Q91XD2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.64■□□□□ 0.73
Lims2Q91XD2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Lims2Q91XD2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lims2Q91XD2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lims2Q91XD2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lims2Q91XD2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lims2Q91XD2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lims2Q91XD2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lims2Q91XD2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.63■□□□□ 0.73
Lims2Q91XD2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lims2Q91XD2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lims2Q91XD2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lims2Q91XD2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lims2Q91XD2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.63■□□□□ 0.73
Lims2Q91XD2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lims2Q91XD2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lims2Q91XD2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lims2Q91XD2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lims2Q91XD2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lims2Q91XD2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lims2Q91XD2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Lims2Q91XD2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lims2Q91XD2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lims2Q91XD2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.62■□□□□ 0.73
Lims2Q91XD2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.62■□□□□ 0.73
Lims2Q91XD2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lims2Q91XD2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Lims2Q91XD2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lims2Q91XD2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.62■□□□□ 0.73
Lims2Q91XD2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.62■□□□□ 0.73
Lims2Q91XD2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lims2Q91XD2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Lims2Q91XD2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lims2Q91XD2 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.62■□□□□ 0.73
Lims2Q91XD2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Lims2Q91XD2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.62■□□□□ 0.73
Lims2Q91XD2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.61■□□□□ 0.73
Lims2Q91XD2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lims2Q91XD2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lims2Q91XD2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lims2Q91XD2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lims2Q91XD2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lims2Q91XD2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lims2Q91XD2 Gm12933-201ENSMUST00000120203 872 ntBASIC19.61■□□□□ 0.73
Lims2Q91XD2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.61■□□□□ 0.73
Lims2Q91XD2 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.61■□□□□ 0.73
Lims2Q91XD2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Lims2Q91XD2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Lims2Q91XD2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.61■□□□□ 0.73
Lims2Q91XD2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lims2Q91XD2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lims2Q91XD2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Lims2Q91XD2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Lims2Q91XD2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms