Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Gm22238-201ENSMUST00000175222 88 ntBASIC20.18■□□□□ 0.82
SfpqQ8VIJ6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SfpqQ8VIJ6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SfpqQ8VIJ6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SfpqQ8VIJ6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SfpqQ8VIJ6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SfpqQ8VIJ6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SfpqQ8VIJ6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SfpqQ8VIJ6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SfpqQ8VIJ6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SfpqQ8VIJ6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SfpqQ8VIJ6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SfpqQ8VIJ6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SfpqQ8VIJ6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SfpqQ8VIJ6 Gm15546-201ENSMUST00000122095 826 ntBASIC20.17■□□□□ 0.82
SfpqQ8VIJ6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SfpqQ8VIJ6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SfpqQ8VIJ6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.17■□□□□ 0.82
SfpqQ8VIJ6 Gm5812-201ENSMUST00000061073 957 ntBASIC20.17■□□□□ 0.82
SfpqQ8VIJ6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.17■□□□□ 0.82
SfpqQ8VIJ6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SfpqQ8VIJ6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SfpqQ8VIJ6 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.17■□□□□ 0.82
SfpqQ8VIJ6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SfpqQ8VIJ6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SfpqQ8VIJ6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SfpqQ8VIJ6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SfpqQ8VIJ6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SfpqQ8VIJ6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SfpqQ8VIJ6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SfpqQ8VIJ6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SfpqQ8VIJ6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SfpqQ8VIJ6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SfpqQ8VIJ6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SfpqQ8VIJ6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
SfpqQ8VIJ6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SfpqQ8VIJ6 BC021767-201ENSMUST00000126387 1716 ntBASIC20.16■□□□□ 0.82
SfpqQ8VIJ6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SfpqQ8VIJ6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SfpqQ8VIJ6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SfpqQ8VIJ6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SfpqQ8VIJ6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SfpqQ8VIJ6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SfpqQ8VIJ6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.15■□□□□ 0.82
SfpqQ8VIJ6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SfpqQ8VIJ6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SfpqQ8VIJ6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SfpqQ8VIJ6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SfpqQ8VIJ6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SfpqQ8VIJ6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.14■□□□□ 0.81
SfpqQ8VIJ6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SfpqQ8VIJ6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SfpqQ8VIJ6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SfpqQ8VIJ6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SfpqQ8VIJ6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SfpqQ8VIJ6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SfpqQ8VIJ6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SfpqQ8VIJ6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SfpqQ8VIJ6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SfpqQ8VIJ6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.13■□□□□ 0.81
SfpqQ8VIJ6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SfpqQ8VIJ6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SfpqQ8VIJ6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SfpqQ8VIJ6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SfpqQ8VIJ6 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.13■□□□□ 0.81
SfpqQ8VIJ6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SfpqQ8VIJ6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SfpqQ8VIJ6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
SfpqQ8VIJ6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SfpqQ8VIJ6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SfpqQ8VIJ6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SfpqQ8VIJ6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.12■□□□□ 0.81
SfpqQ8VIJ6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SfpqQ8VIJ6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SfpqQ8VIJ6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SfpqQ8VIJ6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SfpqQ8VIJ6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SfpqQ8VIJ6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SfpqQ8VIJ6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SfpqQ8VIJ6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SfpqQ8VIJ6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SfpqQ8VIJ6 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.11■□□□□ 0.81
SfpqQ8VIJ6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SfpqQ8VIJ6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SfpqQ8VIJ6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SfpqQ8VIJ6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SfpqQ8VIJ6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SfpqQ8VIJ6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SfpqQ8VIJ6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SfpqQ8VIJ6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SfpqQ8VIJ6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.1■□□□□ 0.81
SfpqQ8VIJ6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
SfpqQ8VIJ6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SfpqQ8VIJ6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SfpqQ8VIJ6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SfpqQ8VIJ6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SfpqQ8VIJ6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.1■□□□□ 0.81
SfpqQ8VIJ6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SfpqQ8VIJ6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SfpqQ8VIJ6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms