Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rab40cQ8VHQ4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Rab40cQ8VHQ4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rab40cQ8VHQ4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rab40cQ8VHQ4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rab40cQ8VHQ4 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rab40cQ8VHQ4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rab40cQ8VHQ4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rab40cQ8VHQ4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rab40cQ8VHQ4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Rab40cQ8VHQ4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rab40cQ8VHQ4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rab40cQ8VHQ4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Rab40cQ8VHQ4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Rab40cQ8VHQ4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rab40cQ8VHQ4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rab40cQ8VHQ4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rab40cQ8VHQ4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rab40cQ8VHQ4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Gm40881-201ENSMUST00000223397 166 ntBASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab40cQ8VHQ4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rab40cQ8VHQ4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Rab40cQ8VHQ4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rab40cQ8VHQ4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Etf1-202ENSMUST00000180351 108 ntBASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Gm9870-201ENSMUST00000063874 645 ntBASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab40cQ8VHQ4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rab40cQ8VHQ4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rab40cQ8VHQ4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rab40cQ8VHQ4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.56■□□□□ 0.08
Rab40cQ8VHQ4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms