Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpa1Q8VEE4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpa1Q8VEE4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.22■□□□□ 0.67
Rpa1Q8VEE4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.22■□□□□ 0.67
Rpa1Q8VEE4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Rpa1Q8VEE4 Gm10232-201ENSMUST00000089221 720 ntBASIC19.22■□□□□ 0.67
Rpa1Q8VEE4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpa1Q8VEE4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpa1Q8VEE4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpa1Q8VEE4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rpa1Q8VEE4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpa1Q8VEE4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpa1Q8VEE4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpa1Q8VEE4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rpa1Q8VEE4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpa1Q8VEE4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rpa1Q8VEE4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpa1Q8VEE4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpa1Q8VEE4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rpa1Q8VEE4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.21■□□□□ 0.67
Rpa1Q8VEE4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.21■□□□□ 0.67
Rpa1Q8VEE4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpa1Q8VEE4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Rpa1Q8VEE4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.66
Rpa1Q8VEE4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpa1Q8VEE4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpa1Q8VEE4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rpa1Q8VEE4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rpa1Q8VEE4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rpa1Q8VEE4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rpa1Q8VEE4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.2■□□□□ 0.66
Rpa1Q8VEE4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpa1Q8VEE4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpa1Q8VEE4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpa1Q8VEE4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.2■□□□□ 0.66
Rpa1Q8VEE4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpa1Q8VEE4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rpa1Q8VEE4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
Rpa1Q8VEE4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpa1Q8VEE4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpa1Q8VEE4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpa1Q8VEE4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpa1Q8VEE4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpa1Q8VEE4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpa1Q8VEE4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpa1Q8VEE4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rpa1Q8VEE4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Rpa1Q8VEE4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Rpa1Q8VEE4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpa1Q8VEE4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpa1Q8VEE4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpa1Q8VEE4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rpa1Q8VEE4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpa1Q8VEE4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpa1Q8VEE4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rpa1Q8VEE4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rpa1Q8VEE4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpa1Q8VEE4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpa1Q8VEE4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rpa1Q8VEE4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rpa1Q8VEE4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rpa1Q8VEE4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpa1Q8VEE4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rpa1Q8VEE4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Rpa1Q8VEE4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpa1Q8VEE4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rpa1Q8VEE4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpa1Q8VEE4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpa1Q8VEE4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpa1Q8VEE4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpa1Q8VEE4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpa1Q8VEE4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpa1Q8VEE4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpa1Q8VEE4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpa1Q8VEE4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.17■□□□□ 0.66
Rpa1Q8VEE4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpa1Q8VEE4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpa1Q8VEE4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpa1Q8VEE4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rpa1Q8VEE4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rpa1Q8VEE4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rpa1Q8VEE4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.17■□□□□ 0.66
Rpa1Q8VEE4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Rpa1Q8VEE4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpa1Q8VEE4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpa1Q8VEE4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpa1Q8VEE4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpa1Q8VEE4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpa1Q8VEE4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Rpa1Q8VEE4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
Rpa1Q8VEE4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rpa1Q8VEE4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpa1Q8VEE4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpa1Q8VEE4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rpa1Q8VEE4 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.16■□□□□ 0.66
Rpa1Q8VEE4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Rpa1Q8VEE4 Gm40881-201ENSMUST00000223397 166 ntBASIC19.16■□□□□ 0.66
Rpa1Q8VEE4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpa1Q8VEE4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpa1Q8VEE4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms