Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lmcd1Q8VEE1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Lmcd1Q8VEE1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.5■□□□□ 0.87
Lmcd1Q8VEE1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lmcd1Q8VEE1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lmcd1Q8VEE1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Lmcd1Q8VEE1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Lmcd1Q8VEE1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.5■□□□□ 0.87
Lmcd1Q8VEE1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lmcd1Q8VEE1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lmcd1Q8VEE1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.5■□□□□ 0.87
Lmcd1Q8VEE1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.5■□□□□ 0.87
Lmcd1Q8VEE1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lmcd1Q8VEE1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lmcd1Q8VEE1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.49■□□□□ 0.87
Lmcd1Q8VEE1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lmcd1Q8VEE1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Lmcd1Q8VEE1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lmcd1Q8VEE1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Lmcd1Q8VEE1 Gm44549-201ENSMUST00000208351 577 ntBASIC20.49■□□□□ 0.87
Lmcd1Q8VEE1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.49■□□□□ 0.87
Lmcd1Q8VEE1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lmcd1Q8VEE1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lmcd1Q8VEE1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lmcd1Q8VEE1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lmcd1Q8VEE1 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.49■□□□□ 0.87
Lmcd1Q8VEE1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lmcd1Q8VEE1 Gm7860-201ENSMUST00000121190 879 ntBASIC20.48■□□□□ 0.87
Lmcd1Q8VEE1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Lmcd1Q8VEE1 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.48■□□□□ 0.87
Lmcd1Q8VEE1 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.48■□□□□ 0.87
Lmcd1Q8VEE1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lmcd1Q8VEE1 Gm10819-201ENSMUST00000099988 561 ntBASIC20.48■□□□□ 0.87
Lmcd1Q8VEE1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lmcd1Q8VEE1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lmcd1Q8VEE1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lmcd1Q8VEE1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lmcd1Q8VEE1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
Lmcd1Q8VEE1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lmcd1Q8VEE1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.47■□□□□ 0.87
Lmcd1Q8VEE1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.47■□□□□ 0.87
Lmcd1Q8VEE1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.47■□□□□ 0.87
Lmcd1Q8VEE1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lmcd1Q8VEE1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lmcd1Q8VEE1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Lmcd1Q8VEE1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lmcd1Q8VEE1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lmcd1Q8VEE1 Mir5122-201ENSMUST00000175004 89 ntBASIC20.46■□□□□ 0.87
Lmcd1Q8VEE1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lmcd1Q8VEE1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lmcd1Q8VEE1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lmcd1Q8VEE1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lmcd1Q8VEE1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lmcd1Q8VEE1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lmcd1Q8VEE1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lmcd1Q8VEE1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.45■□□□□ 0.86
Lmcd1Q8VEE1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lmcd1Q8VEE1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Lmcd1Q8VEE1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Lmcd1Q8VEE1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lmcd1Q8VEE1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lmcd1Q8VEE1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lmcd1Q8VEE1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Lmcd1Q8VEE1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lmcd1Q8VEE1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lmcd1Q8VEE1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.44■□□□□ 0.86
Lmcd1Q8VEE1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.44■□□□□ 0.86
Lmcd1Q8VEE1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lmcd1Q8VEE1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lmcd1Q8VEE1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lmcd1Q8VEE1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lmcd1Q8VEE1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lmcd1Q8VEE1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lmcd1Q8VEE1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lmcd1Q8VEE1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lmcd1Q8VEE1 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.43■□□□□ 0.86
Lmcd1Q8VEE1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lmcd1Q8VEE1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.43■□□□□ 0.86
Lmcd1Q8VEE1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lmcd1Q8VEE1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lmcd1Q8VEE1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lmcd1Q8VEE1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.43■□□□□ 0.86
Lmcd1Q8VEE1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lmcd1Q8VEE1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lmcd1Q8VEE1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Lmcd1Q8VEE1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.42■□□□□ 0.86
Lmcd1Q8VEE1 Gm13158-201ENSMUST00000122007 736 ntBASIC20.42■□□□□ 0.86
Lmcd1Q8VEE1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lmcd1Q8VEE1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Lmcd1Q8VEE1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.42■□□□□ 0.86
Lmcd1Q8VEE1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lmcd1Q8VEE1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lmcd1Q8VEE1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lmcd1Q8VEE1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lmcd1Q8VEE1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.41■□□□□ 0.86
Lmcd1Q8VEE1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Lmcd1Q8VEE1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lmcd1Q8VEE1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lmcd1Q8VEE1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.41■□□□□ 0.86
Lmcd1Q8VEE1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms