Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rnf8Q8VC56 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf8Q8VC56 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf8Q8VC56 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf8Q8VC56 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf8Q8VC56 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf8Q8VC56 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf8Q8VC56 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf8Q8VC56 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf8Q8VC56 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf8Q8VC56 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf8Q8VC56 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf8Q8VC56 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf8Q8VC56 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.33■□□□□ 0.52
Rnf8Q8VC56 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.33■□□□□ 0.52
Rnf8Q8VC56 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf8Q8VC56 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rnf8Q8VC56 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rnf8Q8VC56 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf8Q8VC56 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf8Q8VC56 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf8Q8VC56 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.32■□□□□ 0.52
Rnf8Q8VC56 Golph3-205ENSMUST00000228671 2842 ntBASIC18.32■□□□□ 0.52
Rnf8Q8VC56 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rnf8Q8VC56 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf8Q8VC56 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf8Q8VC56 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf8Q8VC56 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Rnf8Q8VC56 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf8Q8VC56 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf8Q8VC56 Gm45417-201ENSMUST00000209533 758 ntBASIC18.32■□□□□ 0.52
Rnf8Q8VC56 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rnf8Q8VC56 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf8Q8VC56 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rnf8Q8VC56 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rnf8Q8VC56 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rnf8Q8VC56 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.32■□□□□ 0.52
Rnf8Q8VC56 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.31■□□□□ 0.52
Rnf8Q8VC56 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rnf8Q8VC56 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf8Q8VC56 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf8Q8VC56 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf8Q8VC56 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.31■□□□□ 0.52
Rnf8Q8VC56 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rnf8Q8VC56 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.31■□□□□ 0.52
Rnf8Q8VC56 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf8Q8VC56 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf8Q8VC56 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf8Q8VC56 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf8Q8VC56 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf8Q8VC56 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Rnf8Q8VC56 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf8Q8VC56 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rnf8Q8VC56 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf8Q8VC56 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf8Q8VC56 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rnf8Q8VC56 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf8Q8VC56 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf8Q8VC56 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.3■□□□□ 0.52
Rnf8Q8VC56 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf8Q8VC56 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf8Q8VC56 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rnf8Q8VC56 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf8Q8VC56 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf8Q8VC56 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.29■□□□□ 0.52
Rnf8Q8VC56 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf8Q8VC56 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf8Q8VC56 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf8Q8VC56 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.29■□□□□ 0.52
Rnf8Q8VC56 Mir7075-201ENSMUST00000184187 82 ntBASIC18.29■□□□□ 0.52
Rnf8Q8VC56 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.29■□□□□ 0.52
Rnf8Q8VC56 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf8Q8VC56 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.29■□□□□ 0.52
Rnf8Q8VC56 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Rnf8Q8VC56 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf8Q8VC56 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf8Q8VC56 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf8Q8VC56 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf8Q8VC56 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
Rnf8Q8VC56 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf8Q8VC56 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.28■□□□□ 0.52
Rnf8Q8VC56 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rnf8Q8VC56 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf8Q8VC56 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Rnf8Q8VC56 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rnf8Q8VC56 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Rnf8Q8VC56 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf8Q8VC56 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rnf8Q8VC56 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Rnf8Q8VC56 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Rnf8Q8VC56 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.27■□□□□ 0.52
Rnf8Q8VC56 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf8Q8VC56 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.27■□□□□ 0.52
Rnf8Q8VC56 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.27■□□□□ 0.52
Rnf8Q8VC56 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf8Q8VC56 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Rnf8Q8VC56 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rnf8Q8VC56 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rnf8Q8VC56 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rnf8Q8VC56 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms