Protein–RNA interactions for Protein: Q8R2I3

Defb35, Beta-defensin 35, mousemouse

Predictions only

Length 63 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb35Q8R2I3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Defb35Q8R2I3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Defb35Q8R2I3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.36■□□□□ 0.53
Defb35Q8R2I3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Defb35Q8R2I3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Defb35Q8R2I3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Defb35Q8R2I3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Defb35Q8R2I3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Defb35Q8R2I3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Defb35Q8R2I3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Defb35Q8R2I3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Defb35Q8R2I3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Defb35Q8R2I3 Gm13234-201ENSMUST00000120010 747 ntBASIC18.35■□□□□ 0.53
Defb35Q8R2I3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.35■□□□□ 0.53
Defb35Q8R2I3 Gm10033-202ENSMUST00000211874 928 ntBASIC18.35■□□□□ 0.53
Defb35Q8R2I3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.35■□□□□ 0.53
Defb35Q8R2I3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Defb35Q8R2I3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Defb35Q8R2I3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Defb35Q8R2I3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Defb35Q8R2I3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Defb35Q8R2I3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Defb35Q8R2I3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Defb35Q8R2I3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.34■□□□□ 0.53
Defb35Q8R2I3 Gm42778-201ENSMUST00000199644 553 ntBASIC18.34■□□□□ 0.53
Defb35Q8R2I3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Defb35Q8R2I3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Defb35Q8R2I3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Defb35Q8R2I3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Defb35Q8R2I3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.33■□□□□ 0.52
Defb35Q8R2I3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
Defb35Q8R2I3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Defb35Q8R2I3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Defb35Q8R2I3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.33■□□□□ 0.52
Defb35Q8R2I3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Defb35Q8R2I3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Defb35Q8R2I3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Defb35Q8R2I3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Defb35Q8R2I3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Defb35Q8R2I3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Defb35Q8R2I3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Defb35Q8R2I3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.32■□□□□ 0.52
Defb35Q8R2I3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Defb35Q8R2I3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Defb35Q8R2I3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.32■□□□□ 0.52
Defb35Q8R2I3 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.32■□□□□ 0.52
Defb35Q8R2I3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.32■□□□□ 0.52
Defb35Q8R2I3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Defb35Q8R2I3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Defb35Q8R2I3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Defb35Q8R2I3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Defb35Q8R2I3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
Defb35Q8R2I3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Defb35Q8R2I3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Defb35Q8R2I3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Defb35Q8R2I3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.31■□□□□ 0.52
Defb35Q8R2I3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Defb35Q8R2I3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Defb35Q8R2I3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.31■□□□□ 0.52
Defb35Q8R2I3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Defb35Q8R2I3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Defb35Q8R2I3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Defb35Q8R2I3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Defb35Q8R2I3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.31■□□□□ 0.52
Defb35Q8R2I3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Defb35Q8R2I3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Defb35Q8R2I3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Defb35Q8R2I3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Defb35Q8R2I3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Defb35Q8R2I3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Defb35Q8R2I3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Defb35Q8R2I3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Defb35Q8R2I3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Defb35Q8R2I3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Defb35Q8R2I3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Defb35Q8R2I3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Defb35Q8R2I3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Defb35Q8R2I3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Defb35Q8R2I3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.29■□□□□ 0.52
Defb35Q8R2I3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.29■□□□□ 0.52
Defb35Q8R2I3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Defb35Q8R2I3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Defb35Q8R2I3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Defb35Q8R2I3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Defb35Q8R2I3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Defb35Q8R2I3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Defb35Q8R2I3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Defb35Q8R2I3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Defb35Q8R2I3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Defb35Q8R2I3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Defb35Q8R2I3 Gm13146-201ENSMUST00000118508 780 ntBASIC18.28■□□□□ 0.52
Defb35Q8R2I3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.28■□□□□ 0.52
Defb35Q8R2I3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Defb35Q8R2I3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Defb35Q8R2I3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Defb35Q8R2I3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Defb35Q8R2I3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Defb35Q8R2I3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Defb35Q8R2I3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Defb35Q8R2I3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms