Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Atf7Q8R0S1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Atf7Q8R0S1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Atf7Q8R0S1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Atf7Q8R0S1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
Atf7Q8R0S1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Atf7Q8R0S1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Atf7Q8R0S1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Atf7Q8R0S1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Atf7Q8R0S1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Atf7Q8R0S1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Atf7Q8R0S1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC22.6■■□□□ 1.21
Atf7Q8R0S1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Atf7Q8R0S1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Atf7Q8R0S1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC22.6■■□□□ 1.21
Atf7Q8R0S1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Atf7Q8R0S1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Atf7Q8R0S1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Atf7Q8R0S1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Atf7Q8R0S1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Atf7Q8R0S1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Atf7Q8R0S1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Atf7Q8R0S1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Atf7Q8R0S1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Atf7Q8R0S1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Atf7Q8R0S1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Atf7Q8R0S1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
Atf7Q8R0S1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Atf7Q8R0S1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC22.59■■□□□ 1.21
Atf7Q8R0S1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Atf7Q8R0S1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
Atf7Q8R0S1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Atf7Q8R0S1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Atf7Q8R0S1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Atf7Q8R0S1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Atf7Q8R0S1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC22.58■■□□□ 1.21
Atf7Q8R0S1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Atf7Q8R0S1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Atf7Q8R0S1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Atf7Q8R0S1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Atf7Q8R0S1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC22.57■■□□□ 1.2
Atf7Q8R0S1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC22.57■■□□□ 1.2
Atf7Q8R0S1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Atf7Q8R0S1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Atf7Q8R0S1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC22.57■■□□□ 1.2
Atf7Q8R0S1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Atf7Q8R0S1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Atf7Q8R0S1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Atf7Q8R0S1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC22.57■■□□□ 1.2
Atf7Q8R0S1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Atf7Q8R0S1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Atf7Q8R0S1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Atf7Q8R0S1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Atf7Q8R0S1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Atf7Q8R0S1 Gm43060-201ENSMUST00000200621 289 ntBASIC22.56■■□□□ 1.2
Atf7Q8R0S1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Atf7Q8R0S1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Atf7Q8R0S1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Atf7Q8R0S1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Atf7Q8R0S1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Atf7Q8R0S1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atf7Q8R0S1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atf7Q8R0S1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atf7Q8R0S1 Gm5540-201ENSMUST00000131852 1848 ntBASIC22.55■■□□□ 1.2
Atf7Q8R0S1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atf7Q8R0S1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atf7Q8R0S1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Atf7Q8R0S1 Gm21168-201ENSMUST00000199646 1096 ntBASIC22.55■■□□□ 1.2
Atf7Q8R0S1 Gm2011-201ENSMUST00000203124 1263 ntBASIC22.55■■□□□ 1.2
Atf7Q8R0S1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atf7Q8R0S1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Atf7Q8R0S1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Atf7Q8R0S1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Atf7Q8R0S1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Atf7Q8R0S1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC22.54■■□□□ 1.2
Atf7Q8R0S1 Gm7860-201ENSMUST00000121190 879 ntBASIC22.54■■□□□ 1.2
Atf7Q8R0S1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atf7Q8R0S1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atf7Q8R0S1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atf7Q8R0S1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atf7Q8R0S1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Atf7Q8R0S1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Atf7Q8R0S1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.53■■□□□ 1.2
Atf7Q8R0S1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Atf7Q8R0S1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Atf7Q8R0S1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Atf7Q8R0S1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Atf7Q8R0S1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Atf7Q8R0S1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Atf7Q8R0S1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Atf7Q8R0S1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Atf7Q8R0S1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Atf7Q8R0S1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Atf7Q8R0S1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Atf7Q8R0S1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
Atf7Q8R0S1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC22.52■■□□□ 1.2
Atf7Q8R0S1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Atf7Q8R0S1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Atf7Q8R0S1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Atf7Q8R0S1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms