Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ddx54Q8K4L0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Ddx54Q8K4L0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC25.27■■□□□ 1.64
Ddx54Q8K4L0 Mir5122-201ENSMUST00000175004 89 ntBASIC25.27■■□□□ 1.64
Ddx54Q8K4L0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Ddx54Q8K4L0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC25.27■■□□□ 1.64
Ddx54Q8K4L0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ddx54Q8K4L0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ddx54Q8K4L0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ddx54Q8K4L0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ddx54Q8K4L0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ddx54Q8K4L0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC25.26■■□□□ 1.63
Ddx54Q8K4L0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC25.26■■□□□ 1.63
Ddx54Q8K4L0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Ddx54Q8K4L0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC25.26■■□□□ 1.63
Ddx54Q8K4L0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Ddx54Q8K4L0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ddx54Q8K4L0 Gm7367-201ENSMUST00000057611 492 ntBASIC25.26■■□□□ 1.63
Ddx54Q8K4L0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ddx54Q8K4L0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ddx54Q8K4L0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ddx54Q8K4L0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Ddx54Q8K4L0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Ddx54Q8K4L0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ddx54Q8K4L0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC25.25■■□□□ 1.63
Ddx54Q8K4L0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC25.25■■□□□ 1.63
Ddx54Q8K4L0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Ddx54Q8K4L0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ddx54Q8K4L0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ddx54Q8K4L0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ddx54Q8K4L0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC25.24■■□□□ 1.63
Ddx54Q8K4L0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC25.24■■□□□ 1.63
Ddx54Q8K4L0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC25.24■■□□□ 1.63
Ddx54Q8K4L0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC25.24■■□□□ 1.63
Ddx54Q8K4L0 Gm6802-201ENSMUST00000167843 1983 ntBASIC25.24■■□□□ 1.63
Ddx54Q8K4L0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ddx54Q8K4L0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC25.23■■□□□ 1.63
Ddx54Q8K4L0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
Ddx54Q8K4L0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ddx54Q8K4L0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ddx54Q8K4L0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ddx54Q8K4L0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ddx54Q8K4L0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ddx54Q8K4L0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ddx54Q8K4L0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ddx54Q8K4L0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Ddx54Q8K4L0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ddx54Q8K4L0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ddx54Q8K4L0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC25.22■■□□□ 1.63
Ddx54Q8K4L0 Gm13158-201ENSMUST00000122007 736 ntBASIC25.22■■□□□ 1.63
Ddx54Q8K4L0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC25.22■■□□□ 1.63
Ddx54Q8K4L0 Gm26971-201ENSMUST00000182423 1072 ntBASIC25.22■■□□□ 1.63
Ddx54Q8K4L0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ddx54Q8K4L0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ddx54Q8K4L0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ddx54Q8K4L0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ddx54Q8K4L0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ddx54Q8K4L0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ddx54Q8K4L0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC25.21■■□□□ 1.63
Ddx54Q8K4L0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ddx54Q8K4L0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Ddx54Q8K4L0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
Ddx54Q8K4L0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ddx54Q8K4L0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ddx54Q8K4L0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ddx54Q8K4L0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Ddx54Q8K4L0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Ddx54Q8K4L0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ddx54Q8K4L0 Gm15847-201ENSMUST00000121417 1065 ntBASIC25.19■■□□□ 1.62
Ddx54Q8K4L0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC25.19■■□□□ 1.62
Ddx54Q8K4L0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Ddx54Q8K4L0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ddx54Q8K4L0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ddx54Q8K4L0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Ddx54Q8K4L0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ddx54Q8K4L0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Ddx54Q8K4L0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ddx54Q8K4L0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Ddx54Q8K4L0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC25.18■■□□□ 1.62
Ddx54Q8K4L0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Ddx54Q8K4L0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ddx54Q8K4L0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ddx54Q8K4L0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC25.18■■□□□ 1.62
Ddx54Q8K4L0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ddx54Q8K4L0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ddx54Q8K4L0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Ddx54Q8K4L0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC25.17■■□□□ 1.62
Ddx54Q8K4L0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Ddx54Q8K4L0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ddx54Q8K4L0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ddx54Q8K4L0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ddx54Q8K4L0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC25.17■■□□□ 1.62
Ddx54Q8K4L0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ddx54Q8K4L0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ddx54Q8K4L0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC25.16■■□□□ 1.62
Ddx54Q8K4L0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Ddx54Q8K4L0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
Ddx54Q8K4L0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC25.16■■□□□ 1.62
Ddx54Q8K4L0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ddx54Q8K4L0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms