Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Gm13158-201ENSMUST00000122007 736 ntBASIC28.76■■■□□ 2.2
Abca8bQ8K440 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.2
Abca8bQ8K440 AC175538.1-201ENSMUST00000225343 1269 ntBASIC28.76■■■□□ 2.2
Abca8bQ8K440 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.2
Abca8bQ8K440 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
Abca8bQ8K440 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Abca8bQ8K440 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Abca8bQ8K440 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
Abca8bQ8K440 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
Abca8bQ8K440 Gm20472-201ENSMUST00000174403 1240 ntBASIC28.75■■■□□ 2.19
Abca8bQ8K440 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC28.75■■■□□ 2.19
Abca8bQ8K440 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Abca8bQ8K440 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
Abca8bQ8K440 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC28.75■■■□□ 2.19
Abca8bQ8K440 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Abca8bQ8K440 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Abca8bQ8K440 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Abca8bQ8K440 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Abca8bQ8K440 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
Abca8bQ8K440 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Abca8bQ8K440 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
Abca8bQ8K440 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Abca8bQ8K440 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Abca8bQ8K440 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC28.73■■■□□ 2.19
Abca8bQ8K440 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC28.73■■■□□ 2.19
Abca8bQ8K440 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Abca8bQ8K440 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Abca8bQ8K440 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Abca8bQ8K440 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Abca8bQ8K440 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC28.72■■■□□ 2.19
Abca8bQ8K440 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC28.72■■■□□ 2.19
Abca8bQ8K440 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Abca8bQ8K440 Gm10231-201ENSMUST00000181584 441 ntBASIC28.72■■■□□ 2.19
Abca8bQ8K440 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Abca8bQ8K440 Gm10175-202ENSMUST00000208752 441 ntBASIC28.72■■■□□ 2.19
Abca8bQ8K440 AC140264.2-202ENSMUST00000218746 817 ntBASIC28.72■■■□□ 2.19
Abca8bQ8K440 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
Abca8bQ8K440 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Abca8bQ8K440 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
Abca8bQ8K440 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Abca8bQ8K440 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Abca8bQ8K440 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC28.72■■■□□ 2.19
Abca8bQ8K440 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC28.72■■■□□ 2.19
Abca8bQ8K440 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC28.72■■■□□ 2.19
Abca8bQ8K440 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC28.72■■■□□ 2.19
Abca8bQ8K440 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Abca8bQ8K440 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Abca8bQ8K440 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC28.71■■■□□ 2.19
Abca8bQ8K440 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Abca8bQ8K440 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Abca8bQ8K440 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Abca8bQ8K440 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Abca8bQ8K440 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.19
Abca8bQ8K440 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Abca8bQ8K440 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.19
Abca8bQ8K440 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Abca8bQ8K440 Gm9987-201ENSMUST00000069768 567 ntBASIC28.7■■■□□ 2.19
Abca8bQ8K440 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.19
Abca8bQ8K440 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.19
Abca8bQ8K440 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.18
Abca8bQ8K440 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
Abca8bQ8K440 Gm15847-201ENSMUST00000121417 1065 ntBASIC28.69■■■□□ 2.18
Abca8bQ8K440 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Abca8bQ8K440 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
Abca8bQ8K440 Gm43799-201ENSMUST00000201845 579 ntBASIC28.69■■■□□ 2.18
Abca8bQ8K440 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Abca8bQ8K440 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Abca8bQ8K440 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
Abca8bQ8K440 Gm37035-201ENSMUST00000194809 2148 ntBASIC28.69■■■□□ 2.18
Abca8bQ8K440 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC28.69■■■□□ 2.18
Abca8bQ8K440 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Abca8bQ8K440 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
Abca8bQ8K440 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Abca8bQ8K440 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Abca8bQ8K440 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Abca8bQ8K440 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Abca8bQ8K440 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Abca8bQ8K440 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Abca8bQ8K440 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
Abca8bQ8K440 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
Abca8bQ8K440 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
Abca8bQ8K440 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC28.67■■■□□ 2.18
Abca8bQ8K440 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Abca8bQ8K440 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Abca8bQ8K440 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Abca8bQ8K440 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Abca8bQ8K440 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Abca8bQ8K440 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Abca8bQ8K440 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Abca8bQ8K440 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Abca8bQ8K440 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Abca8bQ8K440 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Abca8bQ8K440 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Abca8bQ8K440 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Abca8bQ8K440 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Abca8bQ8K440 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
Abca8bQ8K440 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Abca8bQ8K440 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC28.65■■■□□ 2.18
Abca8bQ8K440 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC28.65■■■□□ 2.18
Abca8bQ8K440 H2-K2-201ENSMUST00000174250 1049 ntBASIC28.65■■■□□ 2.18
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms